KEGG   Cucumis melo (muskmelon): 103502353
Entry
103502353         CDS       T03195                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    103502353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmo04131]
    103502353
   03029 Mitochondrial biogenesis [BR:cmo03029]
    103502353
Membrane trafficking [BR:cmo04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    103502353
 Others
  Specific organelles associated proteins
   Auto phagosome
    103502353
Mitochondrial biogenesis [BR:cmo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    103502353
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR75_1st ATG16 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C NBCH_WD40 Beta-prop_DCAF4 Beta-prop_EIPR1 eIF2A WDR54 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD40_RFWD3 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Cytochrom_D1 Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_VPS8 PQQ_2 Beta-prop_Vps41 Filament
Other DBs
NCBI-GeneID: 103502353
NCBI-ProteinID: XP_008464485
UniProt: A0A1S3CM27
LinkDB
Position
2:25614444..25617321
AA seq 511 aa
MIMSPNEIANEAIKHALRALRQRHLLEEGAHAPAFLALSRPIITQSSEWKEKAEKLELEL
QQCYKAQSRLSEQLVVEVAEVRTSKSLIAEKEAVIDNLEQELSRTRDECSQLKADLEIKI
KALELALCENQEIKTQLEAMTVKAKNAEAENKMLVDRWMLQKMQDAERLNEANALYEDMI
DRLKASGLEKLAQQQVDGVVRQSEEGAEFFVESTVPSVCKHRIRGHEGGCGTILFENNSG
KLISGGQDRTVKLWDTNTGSLSSTLHGCLGSVLDLAITHDNRSVIAASSSNNLYAWDISS
GRVRHTLTGHSDKVCAVDVSKVSSRYVVSAAYDRTIKIWDLQKGYCTKTFIFASNCNAVR
FSMDGQTICSGHVDGNLRLWDIQTGKLISEVAGHSLAVTSLSLSRNGNTILTSGRDNLHN
LFDIRSLEVCGTLRASGNRVASNWSRSCISPDDNYVAAGSADGSVHVWSISKHDIVSTLK
ESTASVLCCSWSGLGKPLASADRNGIIFTWN
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgatcatgtccccaaacgagatagcaaacgaagcgattaagcacgctctcagagccctc
cggcaacgccatctccttgaagaaggtgcgcatgctcctgcttttctcgctctctctcgc
cccatcataacccagagttcggaatggaaggagaaagcggagaagttggaattggagctt
cagcagtgttacaaggctcaatcacgattatctgagcaacttgtggttgaagttgctgag
gttcgaacttctaaatctttgattgcggagaaagaggctgtgattgataatttggagcag
gaattaagtcgaaccagggatgaatgctctcagttgaaggcagacttagagattaaaatt
aaagctctggaactggctttatgtgagaatcaagaaattaaaacacagcttgaagcaatg
acagttaaagctaagaatgcagaggctgaaaataaaatgttggttgaccggtggatgctt
caaaagatgcaggacgcagaacgtctcaatgaggcaaatgcactctatgaggatatgatt
gaccgactcaaggctagtggtttagagaaacttgctcagcaacaggttgatggcgtggtt
cgccaaagcgaagagggtgctgaattctttgtggaatccactgtaccttcagtgtgcaag
cataggatccgtggccatgaaggcggctgtggtactatattgttcgaaaataactcagga
aagttgatcagtggggggcaggaccgtacagtcaaattgtgggatacaaatactggatca
ttaagttccactctacatgggtgccttggttctgttcttgatcttgccattactcatgat
aatagatctgttattgcagcaagcagttcaaacaacttatatgcgtgggacatcagttct
ggaagggtgcgccatacgttgactggtcactcagacaaagtatgtgctgtagatgtaagc
aaagtttctagccgctatgtcgtgagtgctgcatatgatcgcaccattaaaatttgggac
ctacagaagggttactgcaccaagaccttcatttttgccagcaattgtaatgcagttcgc
ttcagcatggatggacagaccatttgttctggccatgtggatggaaatcttcggttgtgg
gatattcaaacaggaaaattgattagcgaagttgctggacactcccttgctgttacatct
ctttctttgtcacgtaatggcaatacaatattgactagtgggagagataacttgcataat
ttatttgatatccgatctttggaagtctgtgggacattaagggcatctgggaatagagta
gcttccaattggagccgttcttgcatcagtccagatgacaactatgttgcagctggttct
gcagatgggtcagttcatgtgtggtcaatatcaaaacacgatatcgttagcactctgaaa
gagagcactgcatctgttctatgttgttcatggagtgggcttggaaaaccgcttgcgtct
gcagacagaaatggtataatatttacatggaactga

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