Cucumis melo (muskmelon): 103502393
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Entry
103502393 CDS
T03195
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103502393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103502393
03009 Ribosome biogenesis [BR:
cmo03009
]
103502393
04131 Membrane trafficking [BR:
cmo04131
]
103502393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmo04147
]
103502393
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103502393
Ribosome biogenesis [BR:
cmo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103502393
Membrane trafficking [BR:
cmo04131
]
SNARE
SNARE associated proteins
Others
103502393
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103502393
Exosome [BR:
cmo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103502393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
AAA_lid_PRS2_C
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
DUF815
TsaE
ResIII
AAA_24
Vps4_C
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
103502393
NCBI-ProteinID:
XP_008464542
UniProt:
A0A1S3CLQ4
LinkDB
All DBs
Position
2:25371629..25376827
Genome browser
AA seq
819 aa
AA seq
DB search
MADPTASSASDKGQEPSSSSDEKNTKRDFSTAILERKKSPNRLVVDEAINDDNSVVSLHP
ATMEKLQFFRGDTILLKGKKRRDTVCIVLADEQCEESKIRMNKIVRGNLRVRLGDVVSVH
QCPDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEF
KVIETDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPL
RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESES
NLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRAHVIVI
GATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAENVDLERVARDTH
GYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEVLNSMAVTNEHFQTALGSSNPSAL
RETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK
TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT
QRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY
IPLPDESSRLQIFEACLRKSPVAKDVNLSALARYTHGFSGADITEICQRACKYAIRENIE
KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKFARRSVSDADIRKYQLFAQTLQQ
SRGIGSEFRFPDRNDNVAAGSADPYASTMGAGDDDDLYG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccaacggcttcttcggcttcagacaagggacaggaaccctcttcttcatcg
gacgagaaaaatactaaacgggatttttccactgcaattttggaacggaagaaatctcca
aatcgcttagttgttgatgaggctataaatgatgataactctgttgtttctttgcatcct
gccaccatggaaaagttgcagttctttagaggagatactattttattaaaggggaagaag
cggagagatacagtgtgtattgtacttgctgatgaacaatgtgaagagtcaaaaatcaga
atgaataaaattgtaagaggtaatctcagagttcgtcttggagatgttgtatctgtccat
cagtgtcctgatgtgaagtatggaaagcgggttcatatcctccctattgatgatacaata
gagggtgttactggcaacctatttgatgcatatttgaaaccttatttcttggaagcatat
cgaccggtaaggaagggtgacctgttcttagtccggggtggaatgagaagtgttgagttc
aaggtcatagaaacggatcctggtgaatactgtgttgttgcacctgataccgagatcttc
tgtgagggagaacccatcaaacgtgaggatgaggagagattaaatgaagttggatatgat
gatgttggaggtgtcaggaagcaaatggctcagatccgagaattagtcgagttaccactt
agacacccacaactcttcaaatcaattggtgttaagcctccaaaagggatattgctatat
gggcctcctggttctggaaaaactcttatagcaagagctgttgctaacgagacaggtgcc
ttcttctttcttattaatgggccggaaataatgtcaaagttagctggtgagagcgaaagt
aatctgaggaaggcatttgaggaagctgaaaagaatgccccctcgattatatttattgat
gagcttgattccattgctccaaagagggagaaaacgcatggagaagtggaaagacggatt
gtgtcccaacttcttaccttgatggatggcctgaagactcgagcacatgttattgttatt
ggagcaactaatagacccaattcaattgaccctgctttgaggagatttggaagatttgat
cgggagattgatattggtgtacccgatgaagtaggacgattggaagtccttaggatccat
acaaagaacatgaaacttgcagagaatgttgatcttgagagagttgcaagggatacacat
ggttatgttggtgccgacctagccgctctttgtactgaagcagcactccagtgtattagg
gagaaaatggatgtcatcgacttggaagatgaatcaatagatgctgaggttttgaattcc
atggctgtaaccaatgaacacttccaaactgctctagggtcttctaatccatcggccttg
cgggaaactgttgtggaggttccaaacgtgtcatgggatgatattggtgggttggaaaat
gttaaaagagagctccaggagactgtccaatacccagtggagcatcctgagaagtttgaa
aaatttggcatgtcaccttctaaaggtgttctcttttatggtccccctggctgtggtaaa
acgctactggctaaggcaattgccaatgaatgccaggccaactttataagtgtgaaagga
cctgagttgctgacgatgtggtttggtgaaagtgaggcaaacgtgagagagatatttgac
aaggctcgtcagtcagctccttgtgtactattttttgatgagctcgattctatagcaact
cagcgtggtagctctgttggagatgctggtggtgcagcagacagagtcttgaaccaactt
cttacagaaatggatggcatgactgcaaagaagactgtgttcataattggggcaacaaac
aggccagacattatcgaccccgcgctgctgaggccgggtcgtctggaccaattaatatac
atcccactccctgacgagtcttctcgtcttcaaatctttgaagcgtgtctgcgaaagtcg
ccagtggcgaaagatgtcaatctgtcagctcttgcacggtatacccatggcttcagtgga
gctgatatcaccgaaatatgtcagcgtgcctgcaagtatgccattagagaaaatattgag
aaggatcttgaaagggagagaaagcagggtgaaaactcagaagccatggaagaagatgag
attgacgatgtctcagagattaaagcagcacattttgaggagtcaatgaagtttgctcgc
cgaagtgtgagcgatgcagacatcaggaagtaccagctctttgctcagaccctacagcaa
tctcgtgggattggttctgagtttcggttccctgatcgaaacgacaatgtggcagcggga
tctgctgacccctatgcttccaccatgggtgctggagatgatgatgacctttatggctga
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