Cucumis melo (muskmelon): 103502423
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Entry
103502423 CDS
T03195
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03013
Nucleocytoplasmic transport
cmo03015
mRNA surveillance pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103502423
09122 Translation
03013 Nucleocytoplasmic transport
103502423
03015 mRNA surveillance pathway
103502423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103502423
03041 Spliceosome [BR:
cmo03041
]
103502423
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103502423
Spliceosome [BR:
cmo03041
]
Common components
Common spliceosomal components
Cap binding complex
103502423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
103502423
NCBI-ProteinID:
XP_008464581
UniProt:
A0A1S3CLT9
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All DBs
Position
7:complement(11693870..11701189)
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AA seq
251 aa
AA seq
DB search
MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGG
SHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD
EEDDDDRKQRH
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttgttcaaggacccaacaaagctatctgtttatcgggatagaagatttcat
ggatcacaagatgaatttgaagtggcacttcagacttcaaccactgtttatgtgggaaat
atgtccttttatacgacagaagagcaagtatatgagcttttttctcgagctggagaaatt
aaaaagataatcatgggtttggataagaattcaaaaacgccttgtggcttttgttttgtc
ctatactattctcgggaggataccgaggatgctgttaaatatataagtggaacaattctt
gatgatcgtcccatccgtgtggattttgattggggatttcaggatggcaggcaatggggc
cgtggtcgaagtggtggacaggtgcgcgatgaatatcgaacagactatgatcctggtaga
ggtggctatggaaagttggttcagaaagagttggaagcacagaggcagcttgtggattat
ggtactggttcactaggctctatggcaccagttatgactcagtatggaaaacatggtgga
agccatggacatgggcatcgtcatggtagagattaccatcatcgtaagcgctaccgagat
gatgatcgccatgcccatgaaagctctaaaagaacgtcagattacgagtctagaagaaac
tccaattatgaatcgagaccggagaagaatccaaggttccgcgagagtggtgattctgat
gaagaggatgacgatgaccgaaagcagcgacactaa
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integrated database retrieval system
