Cucumis melo (muskmelon): 103503014
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Entry
103503014 CDS
T03195
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103503014
Transcription machinery [BR:
cmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103503014
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
103503014
NCBI-ProteinID:
XP_050942921
UniProt:
A0A9I9E0S3
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Position
6:complement(8573728..8578009)
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AA seq
547 aa
AA seq
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MGVVTVSSSAARTPFRLSAKFSNHGSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN
NRSKKRSGNTSKPLKRVKAVLIDEATSCSLDLDYNEAAAKLENIFKLSPMTEDSDMESKD
GRSKRGQQRSKKSDKRPSDGIVRNKTKRIKRLDLDKRIALKNKKEGRAVALLKKQKDTKN
EADEIDGLRLDLEKRIALKSNKEGKAAPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLD
WKKMKIPPVLPSSEHTRLFKLVQPMKALIEVQEELQKELGREPTEAELANATNMNVIQVR
RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFATGPKFQDLCQAGVKGLITAIDRFEPKR
KFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEEEII
AKVGISPERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGTGGDNRRQPALLRLALD
DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD
YLRRYLI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttcaagctctgcagcacgaactccctttcggctgagtgcaaaa
ttttctaatcacggttctacattgaaaagaccatcgattgttgcttttaaagcagataag
cacacaaacacgacactggtctcacctcacgagcaagtaacacttcctgtggagagtaat
aacagaagcaagaaaagatcaggaaatactagcaaaccgttgaagagagttaaagctgtc
cttatagatgaagctacttcatgttctctggatttggattacaatgaggctgctgctaaa
cttgaaaacattttcaagcttagccctatgacagaggattctgatatggaaagtaaagat
ggcagatcaaaaagaggacagcaaaggagcaaaaaatcagacaagagaccaagtgatggc
attgtcaggaacaaaactaagaggattaagcgactagatctcgataaaaggattgcattg
aaaaataaaaaggaaggcagagcggttgctttattaaaaaaacaaaaagataccaaaaat
gaagctgatgagattgatggtctgcgattagatcttgaaaagaggatagcattgaaaagt
aacaaggaaggaaaagcggctccttcattaaggaaacaaaaagaaaccaaaaatgaagat
gatgagattgataggctcgtaagagactactctgcttcaactgatttggttagcttagac
tggaagaaaatgaagattcctcctgttcttccttcatcagagcatacccgcttgttcaaa
ttggttcaaccaatgaaggcacttattgaagtacaagaggagctgcagaaagagttggga
agagaaccaactgaagcagaattggcaaatgcgacgaatatgaatgtaattcaagtaagg
agacaactggaggttggtcgtgctgccagaaataagctcattaagcacaatctacgcctt
gtattatttgtaatcaacaaatactttgaagattttgcaactgggccaaaatttcaagac
ctttgtcaagcaggagtcaagggactcattacagcaattgatcgatttgagccaaagagg
aaatttcggctatcgacttatgctttattttggataaggcatgctattattcggtcaatg
actctgtcaagcttcacacgtgtctcatttggacttgattcggtaagagttgaaattcaa
agagctaaacttgagttattatgtgagcttcatagattaccaaccgaggaagaaataatt
gcaaaagttggcatctcacccgagaggtacctagaagtaatgagagctacaaaaccagtt
tactctctccattcaaggcactcaactacatcggaagagttgatcaatgggatcactgat
gtagaaggcacgggaggcgacaaccgaaggcaaccagctcttctgaggcttgctttagac
gatgtgcttgattctcttaagccgaaggagagcttggtgatcagacagagatatggcctt
gatggcaaaggaaaccgaacattaggtgagatagccggaaatctaaatatttcaagggaa
atggttcgaaagcatgaagtgaaagctctcatgaagctgaagcatcctgcaagagtcgat
taccttcgtcggtatttaatctga
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