Cucumis melo (muskmelon): 103503081
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Entry
103503081 CDS
T03195
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103503081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103503081
Enzymes [BR:
cmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103503081
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103503081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103503081
NCBI-ProteinID:
XP_016903395
UniProt:
A0A1S4E5Z5
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All DBs
Position
1:complement(28743619..28745803)
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AA seq
170 aa
AA seq
DB search
MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIAFFLQRTGSSS
FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
GMPSYSFSCQVSHLTSIAREDFDFGAWVYDGKPNCGQFTSVSPSLIEEKF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcggttctcatatttccagctgcacagacgcctctatacaaccaccaccgat
caatggagtatcaagcaagttcgcaattccaacttccatggctgcttgggggacctgaag
aaccatatctccgattccgacttcatcgcattttttcttcagagaacgggttcttcttct
ttcccttggcaccgccctcagcccttcgacactctcgataccgcttattgcaaggccaag
tacgccgccgagaagtttcagatccttcagttttctctctgtcctttctctgttagagat
tccaagctaatcgcccatccgtacaactttcatttgttccccagagatgaactgaacatt
gggatgccttcttacagtttttcatgtcaagtttcacatctaacatccatagctcgtgaa
gattttgactttggtgcttgggtatatgatggtaagcctaattgtggacaatttacttct
gtttcaccctcactaatagaggagaaattctaa
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