Cucumis melo (muskmelon): 103503332
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Entry
103503332 CDS
T03195
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X2
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103503332
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103503332
Spliceosome [BR:
cmo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103503332
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
MMS21_N
Matrilin_ccoil
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
103503332
NCBI-ProteinID:
XP_008465717
UniProt:
A0A1S3CQZ5
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All DBs
Position
9:complement(8319946..8346384)
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AA seq
1172 aa
AA seq
DB search
MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF
RPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSM
DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVHELASVYNFRIDKFQRLAIQAFLRGS
SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP
LLDEKGTRMNRKLSLNYLQLHASGAKLYKDDGSRRTPKRRGNEISYDNIGSMSRQATLSK
NDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEV
ELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETL
AAGINMPARTAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDKKGHVVLLQTPYEGA
EECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKTFQAWRTLEEARKLVE
QSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDVAYNEIAELQEE
LRSEKRHRTELRKEMESQRIFALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNM
DSSKLGNMFPADNSLSGAESNLDITLEPGSESSYYVALGSDNSWYLFTEKWIKTVYKTGF
PNVALTKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSL
SENDELLQMSQSYMESLERYKVQRNKVARLKKRISRTEGFREYKKILDMANLVEDKIRQL
KTRYKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWI
AMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNS
LEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLAQ
IPKLPDIDPSLQSNASTASDVMNRPPISELAG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcccgccattgatgtctactccatcatttctcttcaacatctctgccccccg
ccgttatcttatcctttcccgtcgttcgtgtgtcctcactattcttcaccttcgattcag
gcctccaggttttgccgccataaacctctcgccttctactctacctatccagttcgattt
cgaccttcctttcagtctccgaggtccattttctctgaaaaatcccaactctccgatgtt
gacgaagacgaggatgaagacgaggatgaagacgacgaagacgacgtggcagccgaggag
tacgacagcgatgcattgggagaattcgagcagagctacgatgaagtcgaattgtcgatg
gacgcttcggaaatttctaatgcacccgaggagttcaaatggcagagagtggaaaagctt
ctcggcgaagttagagagtttggagaaggaattatcgatgtccatgagcttgcttcagtt
tataatttccgcatcgataagtttcaacggctagccatacaagcattcttgagaggatca
tcggtagtggtatcggctcctaccagcagtggaaagactttgattgcggaggctgcggcc
gttgccaccgtagccaggaagagacgattgttttacacgactccactgaaagcattgtcg
aatcagaaatttcgcgagtttcgtgagacgtttggagacagcaacgttgggcttctaact
ggagattctgcagttaataaagatgcaccggttttaatcatgactacagaaattttgcgc
aacatgttgtatcagagtgttggaatggccacatctgcaagtggactatttcatgtggat
gtgattgttttggatgaagttcattacctaagtgatatttctcggggcacagtgtgggaa
gagattgttatttattgcccaaaagaagtgcaacttatttgtctctcagcaacggttgca
aatccagatgagctggctggctggattggtcagattcatgggaaaactgagttagtaaca
tcatcaaagcgtccagtaccattgacttggcatttctctacaaagacctctttacttcct
ctccttgatgagaaaggaacgcgcatgaataggaagctgtcgctcaattatcttcagctt
catgcttcaggagctaaactttataaggatgatggatcaagaaggaccccaaaaaggcgt
gggaatgagatcagctatgacaatattggcagcatgtctagacaagctacactttcaaag
aatgatataaactcaatccgccgttcaaatgttcctcaggtgattgatacattgtggcaa
cttaagtcaaaagatatgctgcctgcagtttggtttatatttagcaggaaaggatgtgat
gcagctgttcagtacatcgatagcagcaatctcttagatgattgtgagaggagtgaagtt
gaacttgcgttgaggaaattccgaattcaatttccagatgctgtccgggaatcggctgtc
aaaggacttctgcaaggagttgctgcacatcacgctggctgcctgcctctctggaagtct
ttcattgaagagctgtttcagaggggacttgtgaaggtcgtctttgcaacagaaacatta
gctgctggaatcaacatgccagctaggacagcagttattgcatccctgagtaaaagaagc
aataatggtcgcacccagttaagctcaaatgaactgcttcaaatggctgggcgtgctgga
cgtcgaggcattgataaaaaaggtcatgtggtgcttcttcaaactccatatgaaggtgct
gaagaatgctgcaagctcctatttgctggcattgaaccacttgtttctcagtttacagct
tcatatggaatggtactgaatcttctcgcaggtgcaaaggttactcatacgagtgaaatg
gacgagacgaaaactttccaagcttggcgaacactagaagaagctaggaagttagttgaa
caaagttttggaaactatgttgggagcaacgtcatgcttgcagctaaggaggagcttgtc
aaaatagaaaaagagattgaaatgctcaatttagaaataactgatgaagccattgataga
aaaagcaggaagttcttgtcagatgtggcatataatgagattgcagagctgcaggaggag
ctacgatcagagaaacgtcacaggacagaactgcgaaaagagatggaatcacaaagaatt
tttgccctcaattctctgttacgaaatctaggagatggacatttgccctttttgtgtttg
caatacaaagattctgaaggagtccaacattcaattcctacagttctccttggaaacatg
gactcatcaaaacttggtaacatgtttcctgctgataattctttgagtggtgcagaatca
aatcttgatatcaccttggagccaggttctgaatcatcttattatgtggcactaggttca
gataactcgtggtacctatttactgagaaatggatcaaaacagtttataaaactggcttt
cctaacgttgctttaactaaaggggatgctttacctcgagagattatgaggagtcttctt
gataaagagggaatgaagtgggagaagcttgctgattctgagcttggaagtttagcatgt
atggaaggatctctagaaacatggtcgtggagtttaaacgtgccggttctgaatagtctt
tctgaaaatgatgaactgttgcaaatgtctcaatcgtacatggagtctttagaaaggtac
aaggtgcaaagaaataaagttgcacgattgaagaaaaggatttctagaacagaaggattc
agagagtacaagaagattttagatatggccaatcttgtagaggacaagatcagacaatta
aagactagatataaacggctaagtaatcgaattgagcaaattgaaccatcagggtggaaa
gagtttttgcagatcagcaatgtgatacatgaaatcagagcacttgatataaatactcat
gttatgtttccacttggagaaaccgcagctgctatacgaggtgaaaatgagctgtggatt
gccatggttctaagaaacaaattcttagtacaactaaagcctacagagcttgctgctgtt
tgtgcaagtttagtttctgaaggcatcaaagttcgcccaggaaggaataacagttacata
ttcgaaccatcaagaacagtaatcaatatgatcaattttctagaagagcagagaaattct
ctagaagatcttcaagaaaagcatggagtgaacatatcatgctgtttggacagccaattt
tcaggaatggttgaggcttgggcatctgggttgacttggagagagatgatgatggattgc
gcaatggacgagggagatctggcacgcctcttgcgacgaacaatcgacttgttggctcag
attccaaaattgcctgatatcgatccatctttgcaaagcaatgcatccactgcttctgat
gtcatgaatcgtccacctataagcgaattggctggataa
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