Cucumis melo (muskmelon): 103503522
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Entry
103503522 CDS
T03195
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103503522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103503522
03036 Chromosome and associated proteins [BR:
cmo03036
]
103503522
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103503522
Coactivators
SAGA/TFTC/STAGA complex
103503522
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103503522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPP1_Dit
Motif
Other DBs
NCBI-GeneID:
103503522
NCBI-ProteinID:
XP_050939444
LinkDB
All DBs
Position
4:906994..916034
Genome browser
AA seq
899 aa
AA seq
DB search
MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS
TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ
ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA
EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
DQMLRLAVCQVQSQPPPSVRQLSPRMPSMGSGTPNFSDPRPFTQLHPKGMNPPAVQSYIP
SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ
QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND
SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS
SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA
VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN
DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC
GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ
KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA
ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE
RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPQATGE
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacccatctattatgaagcttctggaggatgacgaggatgaatcaatgcattcaggt
gcagctgtggatgcttttcaggctgccttgaatagagacatagaaggcgacgctcaggct
gtttcccagacttctgaatctgatgcagccttccctcaggggaataacaatggttcttct
accctctcgttacaagcttctagtcaaagtgaaaatactgaatctcatgtgcaacaaaat
caaaattttcgtttaaagcaagaacaacattcatctcttatggagctagaccgatcagta
cctgaaaatcagcagcaacacagttctgccccctttcaagtttcaaagaatcaaccccaa
gcagatcgtgagcaaggggagggagaacaagtttctgctcagttttctcaaacagcaggg
ctgcaagtttctgaaaaagctccaatccttgtgaatgactcaaacagaatgcagaatcgg
gacaatgaatctcaatacttgaagttacaaaagatgagtaatcagcagtcgatagttgca
gaacaggcaaataaccctctaaaccgtagcaaacaggttccttttgcctctttgatgcct
gtattgatgcctcagcttgataaagacaggggcatgcagcttcagactttatttaacaga
ttgaagaggaatgaaatgaacaaagatgattttatccggctcatgcggggcgttgtgggc
gatcagatgctcagattagcagtttgtcaagtacaatcacagcctcctccttcagtaagg
caactttctcctagaatgccatctatgggttctgggacaccaaatttctctgatccccga
ccatttacacaacttcatccgaaaggcatgaatcctcctgcagttcaatcatacatcccc
tctccagcatcccaagggcggagtagttcaggctatcctgccatggaaaagaatatgcaa
tctttacgagaagtagaacagcgacctgatggtaatggaaatcaaataacttcatccagt
acaagcaccatccaagatagggaacgctcctcagtttctgttcctggacttgagaagcag
cagttacactttcaacagaaatcttttcccatgtatggaaacagtggtaattatcacaca
tataccggttcaaacataaatgcctcttcattgtctcttaaaccccaacctcatgagggt
caagtgaagcagatttcgcagcaggcttccaattttgacaggcaagttacaattaatgat
tccaagcgagtccagggtggaagtgttccacacttacataataacttaacttcacagcaa
aatccatggaaatcatcaacaagtaaagagcagaacataatgagttatgttaaacaagaa
ccttctgatcaggtttctgagcagaacaaaacccaacattcaaatttgcagggcttgtct
tctattcctagcatgcaggctgaacatgttaacacaacccctgggatagcaaaggaccct
tttgacaaacaaacttctaaaatgggttttcctacatcaaacaacgttgtgcctccaaca
tcaaccaatgccgcaaattcaatttcttctgattcaagttctcaacaagagaccaatgct
gtgttgaactctcaggttccttctgctactactcctggaatgcaaaatagggcaccacaa
aaaaaggcagccgtgggccaaaagaagcctcttgaagcacttggctcttccccaccccta
tcaagtaagaagcaaaaagtatctggagcatttgcggatcaaagcattgaacaacttaat
gatgtcactgcagtcagtggagttaatattcgggaagaagaagagcaactattttctagt
gcaaaggaggatagtcgagcttctgaagcatcacggagggttgtacaagaagaagaagag
aggcttctattgcagaaagccccattgcagaagaagctagtggaaatcatggccaaatgt
ggtttgaagggcatgagcaatgacgttgagaaatgtctctcattgtgtgtggaggaaaga
ttacgaggggttattagtaatctaatcaggctgtcaaagcagcgagtggatgcggaaaaa
ccaaggcatcgaactgttattacttcagatgttcggcaacaaattacgttagttaaccaa
aaggccagagaagaatgggagaagaaacaggcagaagaagaaaaactcagaaagcttaat
gatcctgaggatggttcaggtgttgctggtgacaaggataaagatgaaggtcgaatgaaa
tcacttaaggtaaacaaagaggaggatgataaaatgcggacaacagcagcaaatgttgct
gcccgtgctgctgttggaggagatgacatgctatcaaaatggcagcttatggctgagcag
gcgcgacagaaacgtgaaggtggaatggattcagcttctagttctcaggcagggaaagat
gctgtccgtaagtcttcttcagcagcaggaagacacgggaaggacaacctagaaggtgaa
agaaaaggaacttccaggaaatttggaaggaatcaaactaatgcaactcaaactaaggtg
gctcgtagcatttctgttaaagatgtcattgctgtgctgcaaagggaaccccagatgtcc
agatcgaccacgatatatcgtttgtttaacagagttcatccccaagcaactggtgaatag
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