Cucumis melo (muskmelon): 103503646
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Entry
103503646 CDS
T03195
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103503646
Enzymes [BR:
cmo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103503646
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
103503646
NCBI-ProteinID:
XP_008466141
UniProt:
A0A1S3CQT8
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Position
4:1864054..1870916
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AA seq
642 aa
AA seq
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MANEILQLDIQDHHVVMDNGILQVTLSKPDGNVTGIKYNSIDNVLEVDDKETHRGYWDLV
WNSGTSGTTGTFDEMRGKEFEVMVQNEEQIELSFKRNYSFKDKAVPLNIDKRFIMLRNSS
GFYSYAIYEHMREWPPFNLPQTRIVFKLRKDKFHYMAIADDRQRFMPLPEDRLRHRGKPL
DFPEAVLLVNPKEPEFKGEVDDKYQYSCENKDLKVHGWISMDPPVGFWQITPSSEFRSGG
PLKQNLTSHVGPYALAMFLSAHYSGEDLVLKLSPDEPWKKVFGPVFFYLNSVSDGGDPLS
LWEDAKTQMSIEVQSWPYSFPASEDFPPPNQRGRLTGKLFVLDRYINEEKMPATDAYVGL
AAPGEAGSWQTENKGYQFWTKTDADGSFSIEHVRIGDYNLYAWVPGFIGDYRYDVLINVS
PGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYIPDPDPKYINKLYVNHPDRFRQYGL
WERYAELYPDADLVYSVGVSDYTKDWFFAHVNRKRNDGSHLATTWEIKFRVDNIIDKSGT
YTLRVALATANVAELQIQVNNPEAKPSLFTTGMIGHDNAIARHGIHGLYRLYSVDILGSL
LVEGENTIFLSQIINSSSFNGVMYDYIRLEGPPSDSISLQNS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgagatactccaattggatattcaggatcatcacgtagttatggacaatggt
atattgcaagtgacactgtctaagccagatggaaatgtaactgggataaaatacaacagc
attgacaatgttttagaagttgatgataaggaaactcatagagggtactgggaccttgtg
tggaactctgggacttcaggaacgacaggaacattcgatgagatgagaggaaaagaattt
gaagtgatggtgcaaaatgaggaacagatagagctttcatttaaaaggaattattcattt
aaggacaaggctgttcccttaaacatagacaaaaggttcataatgcttcgtaactcctct
ggattctactcatatgccatctatgagcacatgagggaatggccaccattcaaccttcct
caaacgaggattgtgtttaagctaagaaaagacaagtttcactatatggccatagcagat
gacagacagagattcatgccacttcccgaggatagactacgtcacagaggaaaacctttg
gattttccagaggctgtgttgctggtcaatcctaaagaacctgagttcaagggagaggta
gatgataagtaccaatattcttgtgaaaataaagatcttaaagtgcatggatggatatcc
atggatcctccggtgggtttctggcaaatcactccaagcagtgagttcagatcaggtgga
cccctcaaacagaatctaacatctcatgtcggcccatatgctcttgctatgtttcttagt
gctcactattcaggagaggacttggtgttgaagctcagtcctgatgagccttggaagaaa
gtttttggccctgtatttttctatctaaattctgtttctgatggaggtgatccactttct
ttgtgggaagatgctaaaactcagatgtcgatagaagttcaaagttggccatattctttt
ccagcttccgaggatttccccccaccaaaccaacgtggtagattgactggaaaattattt
gtccttgatagatatattaacgaggagaaaatgccggcaactgatgcgtatgtgggactt
gcagcaccaggagaagcaggatcatggcagaccgaaaacaagggctaccagttttggacc
aaaacagatgcagatggctcgtttagcattgaacatgtacgcattggcgactacaatctt
tatgcttgggttcctggcttcattggtgactaccgttatgatgttctcattaatgtgtct
ccaggtagtgatatggatgtaggcgatcttgtttacgagccgcctaggaatgggcccaca
ttatgggaaataggcattcctgatcgctctgctgctgaattctatattcctgatcctgat
ccaaagtacattaacaaattgtatgtcaatcatccggacagattcagacagtatggactg
tgggaaagatatgctgagttatatcctgatgcagacttagtatattcagttggtgtcagt
gattacacaaaagattggttctttgctcatgttaatcgaaagagaaatgatggatcccat
ttagcaaccacatgggaaatcaagtttagagttgataatatcatagataagagcggcacc
tatacattgcgagtggctctggccactgccaatgttgctgaattacagattcaggtaaat
aatccagaagcaaagccaagtttatttacaacaggaatgattggacatgacaatgcaatt
gctaggcatggaattcatggactctatcgactctatagtgttgacatattaggatctcta
cttgtggaaggagaaaacaccatcttcctttcacaaattataaacagttcatctttcaat
ggcgtcatgtatgattatatccgcctcgaaggccccccatccgattcgatatctctacaa
aattcatag
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