Cucumis melo (muskmelon): 103503671
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Entry
103503671 CDS
T03195
Name
(RefSeq) protein ALTERED SEED GERMINATION 2 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmo04121
]
103503671
Ubiquitin system [BR:
cmo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103503671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IP5PC_F
TRM82_WD
Beta-prop_RIG_2nd
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
TPR_1
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
CNOT10_TPR
Motif
Other DBs
NCBI-GeneID:
103503671
NCBI-ProteinID:
XP_008466177
UniProt:
A0A1S3CQV7
LinkDB
All DBs
Position
4:2095649..2109666
Genome browser
AA seq
754 aa
AA seq
DB search
MEDFAFHDGNVCALLESRHINFRQDLTYGLQMHSSFIQRLSQEKELEGHQGCVNAVAWNS
RGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRLKGRGQDDHPIPSSALYRCHTRRVKKLAVEIGNPNVVWSASEDGTLRQHDFREG
MSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLSSGQKKMSPPPCVSYFCPMHLSDRVRSGLHLTHVTFSPNGEEILLSYSG
EHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPVLNGFELQHHVSNLSNSLPLNCAKLDKCR
KLLQTAEKCLEGGNYFGGIEACNEILDGNGRNISVIFKHDSLCTRAALLLKRKWKNDVHM
AIRDCYSARKIDHSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLSPSNSEVAEKVESIK
RDLAAAELEKSNKGNDGALKSAPSGGVLSLSDFLYRSDANSDVSQDGLRSEREDSDYDEE
VELDFETLSGDESHDVDSNVLHGSLNLRIHRRVDPARERVGPNGSCGSPSSQNDATLYQP
EPVIDMKQRYVGHCNIGTDIKQASFLGQKGEYVASGSDDGRWFIWEKRTGRLIKILVGDG
AVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPVPSVVAGGAVGPQAADVLSAIENNQRRL
SRNREAILPFEILERFRMHDFSEGSLHPFECAQS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttcgcctttcacgatggcaacgtatgcgctttgcttgagagcaggcacatc
aactttcgtcaagatctcacctatggtttgcagatgcactcatcattcatccaaagactc
tcccaggaaaaggaactggaggggcaccaggggtgtgttaatgcagtggcctggaattct
cgtggttcacttttgatatctggatcagatgacactcgaataaacatctggagctattct
ggtcgaaagctattgcactctgtggatactgggcattccgcaaacatattttgtacaaaa
tttgttcctgaaacgtctgatgagcttgtggtctcgggagccggggatgcagaggttcgg
ttgtttaatttatctcgcttaaaagggagaggacaagatgatcatcccataccctcatca
gctttgtatcggtgtcacaccagaagagtaaaaaaattagctgttgaaataggaaatcca
aatgtagtatggagtgctagtgaggatgggactcttagacagcacgactttcgagagggc
atgtcttgtcctcctgatggagcttctcaccaagaatgccacaatgttcttcttgatttg
cggtgtggagcaaagaggtcattggctgatcctccccgacaaacccttgctttgaaatcc
tgtgatattagttccactaggcctcatttacttctggttggtggaagtgatgcatttgca
cggttatatgatagaaggatgctgccacccttgtcttccggccagaagaagatgtcgcca
cctccttgtgttagctacttctgtccaatgcatctatctgatcgggttcgatcgggtttg
catttgactcatgttacttttagtccgaatggagaagagatcctgcttagctatagtgga
gaacatgtatacttgatgaatgtaaatcatgctggactaggtacaatgcagtatacatca
ggagatgtttctaagttaatgagcttcactcctgtactcaacggattcgaattgcagcat
catgtttccaatctatctaatagtttgcctttaaattgtgcaaagcttgataaatgcaga
aaattattacaaactgctgaaaaatgcttggagggtgggaactactttggtggaattgaa
gcatgcaacgaaattttggatggaaatggtcgtaatattagtgttatttttaagcacgat
tcattatgcactcgtgctgctttactactcaagcggaagtggaagaatgatgttcatatg
gccataagagattgttacagtgctaggaaaatagatcattcctctttcagagcacattac
tacatgtgcgaagctctatcacagttgggtagacataaggaagccctagattttgcattt
gctgctcagtgtttatccccgtctaattctgaagtcgcagagaaggtggaaagtataaag
agggacctcgcagcagctgaattggaaaaatcaaataaaggcaatgatggagctctaaaa
tcagcaccatcaggtggtgtattatcattaagtgactttctttatcgctcagatgcgaat
agtgatgtttcacaagatgggctgagatcagaaagagaagattctgattatgatgaggag
gtggagctcgactttgaaaccttatctggtgatgaatcccatgatgttgattccaacgtt
ctacatggaagtttaaatcttagaatacatagacgtgttgatccagcaagagagagggtt
ggtccaaacggctcctgtgggtctccatcatcccaaaatgatgcaacactttatcagcct
gaacctgtgattgatatgaaacaaagatatgttggtcattgtaatatcggaactgatatt
aaacaagccagttttctcgggcaaaaaggtgaatatgttgccagtggtagtgatgatggt
agatggtttatttgggaaaagagaactggtaggctgattaaaatacttgttggagatgga
gctgttgtgaattgcgtgcaaagtcatccatttgattgtgcaattgctacgagtgggatc
gacaataccataaagctatggactccaactgctccagttccatcagtcgtagccggagga
gcggttgggccacaggcagccgacgtattgtctgcaatagagaacaatcaacgcagactt
tcccgtaatagagaagccatactgccttttgaaattttggagcggtttaggatgcatgat
ttctcagaaggaagccttcatccatttgaatgtgctcagagttga
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