Cucumis melo (muskmelon): 103504009
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Entry
103504009 CDS
T03195
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103504009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103504009
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103504009
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103504009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF3487
Motif
Other DBs
NCBI-GeneID:
103504009
NCBI-ProteinID:
XP_008466654
UniProt:
A0A1S3CRS2
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Position
4:1845586..1846314
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AA seq
242 aa
AA seq
DB search
MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLN
HLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRI
PSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTV
NDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRM
RR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgttcgacaagtttggtatcataatctcacccaagaattggccattctcaac
gaccaacttttcaagttgccaatgatcgtgatggacactgagttccttggctttctccga
tcaactccgagaggtgctcccgaggaacatctctaccaagatttgaagttcaatctaaac
catttgaaaattcttcaactgggtctcactctgatggataagaacgagcatgttgggttg
tcttgggtgttcaccttttctgattttgatgaacaaacagacttctctagtcctacatca
atccaatatttgaagaacaacaaatggtttgaattcaagaaacataggaaatacagaatt
ccatcggctgaatttcgacgtgcatttttgccgatcttttctagcaatcgaataaccaaa
tggatcacattccatggcatttacgatgttgcttatttgttgaagctaatgatgatcaga
accatgccagagtccatggtggaatttgccaccatagctcaacgtcagcttggtacagtg
aacgacctcaagcacatgatttgcaattgtgaacacttaatgaacggtgaactgggactt
aagagacttgctgagttactcaatgtgaacgacactattttcaacggtggttctgatagt
ttgctgatagctttggcgtatgtgaagatgaagaagatgctcaagtggctttggcgtatg
cgaagatga
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