KEGG   Cucumis melo (muskmelon): 103504157
Entry
103504157         CDS       T03195                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03020  RNA polymerase
cmo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103504157
  09124 Replication and repair
   03420 Nucleotide excision repair
    103504157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmo03021]
    103504157
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103504157
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103504157
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103504157
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103504157
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103504157
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 103504157
NCBI-ProteinID: XP_050946231
UniProt: A0ABM3L884
LinkDB
Position
9:16189210..16218830
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSAA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttttttcacatagttctggagaggaatatgcagctacaccctcgccactttggccgt
aacctacgtgagaacctggtgtccaaactgatgaaagatgttgagggcacctgcagcggc
cggcatgggtttgtagttgcaatcacaggaattgagaatattgggaaaggattgattcgc
gatgggactggctttgtcacttttcccgtgaaataccaatgtgtggtgtttcgaccattc
aagggagaaattttggaagcggttgttactatggtaaacaagatgggcttctttgctgaa
gctggacctgttcagatttttgtttcaaaccatttgataccagatgatatggagtttcag
tctggagatgtgccaaactataccacgtcagatggatcggttaagattcagaaggatagt
gaagttcgattaaagataattggcactcgagtagatgcaactgaaattttttgtattgga
accataaaagatgacttcttgggtgtgatcaatgacccttcagcggcttag

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