KEGG   Cucumis melo (muskmelon): 103504523
Entry
103504523         CDS       T03195                                 
Name
(RefSeq) sm-like protein LSM7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03018  RNA degradation
cmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103504523
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103504523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103504523
   03041 Spliceosome [BR:cmo03041]
    103504523
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103504523
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103504523
Spliceosome [BR:cmo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103504523
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 103504523
NCBI-ProteinID: XP_050939110
LinkDB
Position
4:complement(25085635..25092976)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDPDDPLKT
TDQTRPLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctggaagaaaagaaactgttctggatttggctaagtttgtagacaaaggcgtccaa
gtgaagcttactggcggtagacaagttactggaacgctcaaaggatatgatcaattgcta
aaccttgtgctggatgaagctatagagtttttaagagatcctgatgatccattgaagaca
acagatcaaaccaggcctcttggcctaattgtgtgcaggggaactgctgtgatgctggtg
tctccagttgatggaacagacgagattgctaaccccttcatccagcccgatggtgcatag

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