Cucumis melo (muskmelon): 103504523
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Entry
103504523 CDS
T03195
Name
(RefSeq) sm-like protein LSM7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103504523
09123 Folding, sorting and degradation
03018 RNA degradation
103504523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103504523
03041 Spliceosome [BR:
cmo03041
]
103504523
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103504523
mRNA degradation factors
5'-3' decay
Lsm complex
103504523
Spliceosome [BR:
cmo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103504523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
103504523
NCBI-ProteinID:
XP_050939110
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Position
4:complement(25085635..25092976)
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDPDDPLKT
TDQTRPLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagaaaagaaactgttctggatttggctaagtttgtagacaaaggcgtccaa
gtgaagcttactggcggtagacaagttactggaacgctcaaaggatatgatcaattgcta
aaccttgtgctggatgaagctatagagtttttaagagatcctgatgatccattgaagaca
acagatcaaaccaggcctcttggcctaattgtgtgcaggggaactgctgtgatgctggtg
tctccagttgatggaacagacgagattgctaaccccttcatccagcccgatggtgcatag
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