Cucumis melo (muskmelon): 11123119
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Entry
11123119 CDS
T03195
Symbol
rpoA, CumesmeC_p054
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
11123119 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
11123119 (rpoA)
03400 DNA repair and recombination proteins [BR:
cmo03400
]
11123119 (rpoA)
Enzymes [BR:
cmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
11123119 (rpoA)
Transcription machinery [BR:
cmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
11123119 (rpoA)
DNA repair and recombination proteins [BR:
cmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
11123119 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
ParB
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
11123119
NCBI-ProteinID:
YP_004841815
UniProt:
A0A1S4EU41
G3ETS9
LinkDB
All DBs
Position
Pltd:complement(79915..80916)
Genome browser
AA seq
333 aa
AA seq
DB search
MVREKIRVSTRTLKWKCVESRADSKRLYYGRFILSPLMKGQGDTIGIAMRKALLGEIEGT
CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD
IILPPSVEIVDNTQHIANLTEPINFCIELKIERNRGYHIQTPNNFQDASYPMDAIFMPVR
NVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEKENFH
FKNNKQKVTLPLFTFHEKLAKLRKKKKERALKYIFIDQSELPPRIYNCLKRCNIHTLFDL
LNNSPDELMKIKHFRIEDVKHILDILEMEKNFA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaaatcagagtatcgactcggacactaaagtggaagtgtgttgaatca
agagcagacagtaagcgtctttattatggacgctttattctgtctccacttatgaaggga
caaggggatactataggcattgcgatgcgaaaagctttgcttggagaaatagagggaaca
tgtatcacacgtgcaaaatctgaaaaaatcccacatgaatactctaccatagtcggtatt
caagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctg
tatggaactcgtgatgcgtctatttgtgtcaagggtcctggatgcgtaactgctcaagac
atcatcttaccaccttcggtggaaatcgttgataatacacagcatatagctaacctaacg
gaaccaattaatttttgtattgaattaaagatcgagaggaatcgcggatatcatatacaa
acgccaaataattttcaagacgcaagttatcctatggatgctatattcatgcctgttcga
aatgttaatcatagtattcattcttatgtaaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggaccaatggaagtttaactcctaaagaagcacttcatgaagcctctcgg
aatttgattgatttatttattccttttttacatgcggaagaagaaaaagaaaacttccat
tttaaaaataataaacaaaaagttactttacccctttttacttttcatgagaaattggcg
aaactaagaaaaaagaaaaaagaaagagcattaaaatatatttttattgaccaatcagaa
ttgcctcctaggatctataattgcctcaaaaggtgcaatatacatacattatttgacctt
ttgaataatagtccagacgaacttatgaaaatcaaacattttcgcatagaagacgtaaaa
catatattagacattctcgaaatggaaaagaattttgcataa
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