Campylobacter molothri: CMOL_0260
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Entry
CMOL_0260 CDS
T10922
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cmol Campylobacter molothri
Pathway
cmol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMOL_0260 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmol03021
]
CMOL_0260 (rpoB)
03400 DNA repair and recombination proteins [BR:
cmol03400
]
CMOL_0260 (rpoB)
Enzymes [BR:
cmol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CMOL_0260 (rpoB)
Transcription machinery [BR:
cmol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMOL_0260 (rpoB)
DNA repair and recombination proteins [BR:
cmol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMOL_0260 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ULN99449
LinkDB
All DBs
Position
245914..250041
Genome browser
AA seq
1375 aa
AA seq
DB search
MLDNKLRNRLRVDFSNILKQIEIPNLLQLQKASFDYFLNFNNGESGIEKVFKSIFPIHDP
QNRLSLEYVNSEIGKPKYTIRECMERGLTYSVNLKMKIRLTLHERDEKTGEKVGIKDIKE
QEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEESSTVANKLVYTAQIIPDR
GSWLYFEYDAKDVLYVRINKRRKVPITMLFRALGYKKQDIIKLFYPIQTIHVKKDRFLTE
FNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKKAEQLIKDGLKWIEYPIEVLLNRYLANP
IFDKNSGEMLFDSLTLIDESKLTKIKEQKIFEIANDLANGVDTAIINSFIQDNETLKLLK
QTENIEDENDLAAIRIYKVMRPGEPVVKDAAKTFVNDLFFNPERYDLTKVGRMKMNHKLG
LDVPEYVTVLTNEDIIKTAKYLIKVKNGKGHIDDRDHLGNRRIRSIGELLANELHLGLAK
MQKAIRDKFTSLNSDIDKVMPYDLINPKMITTTIIEFFTGGQLSQFMDQTNPLSEITHKR
RLSALGEGGLVKERAGFEVRDVHATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVE
APYKKVVNGKVTDEIVYLTATQEEGLFIAPASTKVDAKGNIIEEFVEARQDGETILAKRE
EVQLIDLCSGMVVGVAASLIPFLEHDDANRALMGSNMQRQAVPLLTSNAPIVGTGMESTI
ARDAWEAVKAKRGGIVEKVDNKSIFILGEDEKGPFIDHYIMEKNLRTNQNTNYIQHPIVK
KGEAVKAGQIIADGPSMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVH
IYEKEIEARELKDGIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGE
VKPTPEERLLRAIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDERALKAYDKE
KMSLEKEHHDRLLMMDREEMLRVCALLSKSTLTSSQKIGDKNYKKGEKADLSDLEKINRF
TLTTIIKAYSKEVQKQYEDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVVKLVKVYI
ATKRKLKVGDKMAGRHGNKGIVSTIIPEVDMPYLANGKSVDIALNPLGVPSRMNIGQILE
SHLGLVGLRLGEQIQEIFDRKQKDFIKELRAKMLEICSIPRLANEKEFIKKLSDEELLNY
ARDWSKGIKFATPVFEGVSIEEFKKLFELAKIDMDGKTELYDGRTGEKIAERVHVGCMYM
LKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLREMLT
IKSDDVEGRFNAYKAITKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgttagataataaattaagaaatcgtttaagagtagatttctccaatattttaaaacaa
atagaaattccaaatcttttacaattgcaaaaagcaagttttgattattttttaaatttt
aataacggtgaaagtggtatagaaaaagtttttaaatcaatttttccaatacatgatccg
caaaatagattaagtttagaatatgtaaatagcgaaataggtaaaccaaaatatactatt
cgtgaatgtatggaaagaggtttaacttactctgtaaatttaaaaatgaaaatccgtctt
actttacatgagagagatgaaaaaacaggtgagaaagtcggtataaaagacattaaagag
caagaaatttatatcagagaaattccattaatgacagatcgtgtatcttttatcattaat
ggggtggaaagagtcgttgttaatcaacttcatagaagtcctggtgttatttttaaagag
gaagaaagttcaacagtagctaataaacttgtttatacagcgcaaattattccagatcgt
ggttcttggttatattttgaatatgatgctaaagatgtactttacgtaagaattaataaa
agaagaaaagtacctataactatgctttttagagccctaggatataaaaaacaagatatt
ataaaactattttatcctattcaaacaattcatgttaaaaaagatagatttttgacagaa
tttaatcctaatgattttatggatagaatagaatatgatatcaaggatgaaaaaggtaaa
attgttcatcaagcaggaaaaagattaacaaagaagaaagctgaacaattgattaaagat
ggattaaaatggatagaatatccaatagaagttttattaaatcgttatttagcgaatcct
atttttgacaaaaatagtggcgaaatgctttttgattctttaacgcttattgatgaaagt
aagcttacaaaaataaaagaacaaaaaatttttgaaatcgcaaatgatttagcaaatgga
gtagatactgctattattaattcatttatacaagataatgaaactttaaaattattaaaa
caaactgaaaatattgaagatgaaaatgatctagctgcaataagaatttataaggttatg
agaccaggtgaaccagtagttaaagatgcagcaaaaacttttgtcaatgatttatttttt
aatccagaaagatatgatttaactaaagttggtcgtatgaaaatgaatcataaattaggt
cttgatgttcctgagtatgtgactgttttaactaatgaagatattattaaaactgcaaaa
tatttgattaaagttaaaaatggcaaaggtcatattgatgatagagatcatttaggaaat
cgccgtattagatctataggtgagcttttagctaatgaacttcatttaggattggcaaaa
atgcaaaaagctatccgagataaatttacttctttaaattctgatatagataaagttatg
ccttatgatttaattaatcctaagatgattactacaacgattatcgagttttttacaggt
ggacaactttctcaatttatggatcaaacaaatccactgagcgaaatcactcataaacgt
cgtttatctgcacttggagaaggaggacttgtaaaagaaagagcgggttttgaagttcgc
gatgtccatgcaactcattatggtagaatttgtcccgtagaaactccggaaggacaaaat
attggtctgatcaatactctttcaacttatgctaaagtgaatgagcttggttttgttgaa
gctccttataaaaaagttgttaatggaaaagttacagatgaaattgtttatttaactgct
acacaagaagaaggtttgtttattgcacctgcatcaactaaagtggatgctaagggtaat
attatcgaggaatttgttgaggcgagacaagatggagaaactatacttgccaaaagagaa
gaagttcaacttatcgatctttgctcaggtatggttgttggtgttgcagcttctttaatt
cctttcttagagcatgatgatgccaatagagccttaatgggttctaatatgcaacgtcaa
gcagttcctctcttaacttcaaatgctcctattgtaggtacgggaatggagagtacgatt
gcgcgtgatgcttgggaagctgttaaagctaaacgagggggtatagtagaaaaggtagat
aataaaagtatttttatcttgggcgaagatgaaaaaggtccttttattgatcactatatt
atggagaaaaatttacgtaccaaccaaaatacaaattatattcagcatcctattgttaaa
aaaggagaagcggttaaagcaggacaaattattgccgatggcccttcaatggatcaagga
gaattagctattggaaaaaatgcactaattgcttttatgccttggaatggttacaactat
gaagatgctattgtagttagtgaaagaatcattcgtgaagatacatttacaagtgtccat
atctatgaaaaagaaatcgaggctagagagttaaaagatggtatagaagaaattaccaaa
gatataccaaatgttaaagaagaagatgttgcacatttggatgaaagtggaattgcaaaa
ataggaacccatattaaacctggtatgattttagttggaaaagtttctccaaaaggtgaa
gttaaaccaactccagaagagagacttttaagagctatttttggtgaaaaagcaggtcat
gttgtcaataaatctttatatgctaccgcttctttagaaggtgtggttgtagatgtgaaa
atatttacaaaaaaaggctatgaaaaagatgaaagagctctgaaagcatatgataaagaa
aaaatgtctttggaaaaagaacatcatgatagacttttgatgatggacagagaagaaatg
cttagagtttgcgctttgttatctaaatcaactttgactagcagtcaaaaaattggtgat
aaaaattataaaaaaggcgaaaaagctgacctaagtgatttagaaaaaattaatcgtttt
actcttactactattattaaagcttattcgaaggaagttcaaaaacaatatgaagatttg
aaaaatcatttccaaaatgaaaagaaaaaactaaaagctgaacatgatgaaaagcttgaa
attttagaaaaagatgatattttaccaagcggggtggttaagctcgtaaaagtttatatt
gctacaaaacgaaagttaaaagtaggtgataaaatggcaggacgccacggaaataagggt
attgtttctactataattccagaggttgatatgccttatcttgcaaatggaaaaagtgta
gatattgcgctcaatcctttaggggttccaagtcgtatgaatataggtcaaattttagaa
agccatttgggacttgttggcttaagacttggagagcaaattcaagaaatttttgataga
aaacaaaaagattttattaaagagttaagagcaaaaatgcttgaaatttgttctattcca
agactcgcaaatgaaaaagaatttattaaaaaattaagcgatgaagagcttttaaattac
gctagagattggagtaaagggattaaatttgcaaccccagtttttgaaggtgttagcata
gaggaatttaaaaaattatttgaattagcaaaaattgatatggatggaaagacagagctt
tatgatggaagaactggtgaaaagattgcagagcgtgtccatgtaggatgtatgtatatg
ctaaaacttcaccatttagttgatgaaaaagttcatgcaagaagcacaggtccttatagt
cttgtaacccagcagccagttggtggtaaagcgctttttgggggtcaaagatttggagaa
atggaagtttgggcacttgaagcttatggagcagcacatactttaagagaaatgctaact
attaagtcagatgatgtagaaggtagatttaatgcttataaagcaataactaaaggagaa
aatgttccagcaacaggaatacctgaaacattttttgttttaactaatgaacttaaatca
cttgcattagatgttgagatttttgataaggatgaggacaatgagtaa
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integrated database retrieval system
