Caldicellulosiruptor morganii: OTK00_000418
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Entry
OTK00_000418 CDS
T08774
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cmor
Caldicellulosiruptor morganii
Pathway
cmor03030
DNA replication
cmor03430
Mismatch repair
cmor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OTK00_000418
03430 Mismatch repair
OTK00_000418
03440 Homologous recombination
OTK00_000418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmor03032
]
OTK00_000418
03400 DNA repair and recombination proteins [BR:
cmor03400
]
OTK00_000418
Enzymes [BR:
cmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OTK00_000418
DNA replication proteins [BR:
cmor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OTK00_000418
DNA repair and recombination proteins [BR:
cmor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OTK00_000418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
DNA_pol3_delta
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
WAM34238
LinkDB
All DBs
Position
440359..441321
Genome browser
AA seq
320 aa
AA seq
DB search
MNLDTFIGQKEIVFTLKKALKNPFHAYIFEGEKGLGKKLLARIFSKHILCENKSSCGVCK
SCHLFDASSHPDFKIIKRQEDKKEISVESVREIIKDLSRGPIFSDRKVFVIEEGEELSTS
AQNALLKTLEEPPPYAIFIITCNNIERLLPTVISRSVVLSFKRYSASEIARILSQNNLEP
KDYIIKLCKGNPKITLDFYNKEVQNKRDYIFDKILQYDGAGFGLIKEFESEFEKFKNDFE
FLFENIIYFLRDALLYKKTKSIELITNTDKLEKIIQFSNKHTITHIYRLLQDFMVLDRYP
DANVVSENVLDMIFLKLSGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagatacgttcattggtcaaaaagagattgtatttacactaaaaaaggcactg
aaaaatccttttcatgcttatatatttgaaggagaaaaagggctcgggaaaaagcttttg
gcaaggatattctcaaaacacattctatgtgaaaacaaatcttcatgtggagtttgtaaa
tcctgtcatctttttgatgcatcttcacatccggactttaaaattataaaaaggcaggaa
gataaaaaagagatttcggttgagagcgttcgagagattataaaagacctgtcaagaggt
ccgattttttctgacaggaaagtatttgtaatcgaagagggcgaggagctttcaacaagt
gctcaaaatgctcttttaaaaacactggaagaacctccaccttatgcaatttttataatc
acatgcaacaatattgaaagacttttgccaaccgtaatctcacgatctgttgtgctttcg
tttaagagatattctgcctctgaaatagcaagaattttgagtcagaataatcttgagcca
aaagactacataataaaactttgcaaaggtaatcctaaaattactcttgatttttacaac
aaagaagttcaaaataaaagagattatatttttgataaaattcttcaatatgatggcgca
ggctttggtttgataaaagagtttgagagtgaatttgaaaagtttaagaatgattttgaa
ttcttatttgaaaacattatatactttctgagagatgctcttttgtacaaaaagacaaag
agtattgaacttatcaccaatacagacaaattagaaaagattatacaattttctaacaaa
cacacaattacccatatatacaggcttttgcaggattttatggttctggatagatatcct
gatgcgaatgttgtttcagaaaatgttcttgatatgatttttttaaaactatcagggggc
taa
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