Caldicellulosiruptor morganii: OTK00_000464
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Entry
OTK00_000464 CDS
T08774
Name
(GenBank) endo-1,4-beta-xylanase
Organism
cmor
Caldicellulosiruptor morganii
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Gene cluster
GFIT
Motif
Pfam:
CBM_4_9
Glyco_hydro_10
CBM9_1
SLH
GH101_dom-5
OppC_N
TFIIA
SAGA-Tad1
Motif
Other DBs
NCBI-ProteinID:
WAM34282
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Position
485144..489934
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AA seq
1596 aa
AA seq
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MKRKFVALIVLFVFLISIIAPSLSPFSYQSARADQQNPAASYVKFDFENGTTQGWGPRGN
STTVETVYRMAYEGDYSLKVSGRTAAWDGAIVDVTSSVSVNTMYTVSLFVYHNDVKPQRF
SVYAYVKDSSGERYIKVADKVVMPQYWKQIFGKFTITTSNPIQSVKLLVCVPSNRSLEFY
ADNIILTSAQPASSGLVKSCNFESGSTDGWQARGTGSDAQISVVDTVAHSGSRSLYVLGR
ADTWQGAQIDMTNLLEKGKDYQFSIWVYQNSGSDQKITLTMQRKNADDSTNYDTIKWQQT
VPSGVWTEVSGSYTVPQTATQLIFYVESPNATLDFYLDDFTVIDKNPPVVNPGLVKSCNF
ESGSTEGWQARGTGSDAQISVVDTVAHSGSRSLYVLGRADTWQGAQIDMTNLLEKGKDYQ
FSIWVYQNSGSDQKITLTMQRKNADDSTNYDTIKWQQTVPSGVWTEVSGSYTVPQTATQL
IFYVESPNATLDFYLDDFTVIDKNPVTIPAAAKEPEWEIPSLCQQYSQYFSIGVAIPYRV
LQNPVERAMVLKHFNSITAENEMKPDAIQRTEGQFNFDVADQYVDFAQSNNIGIRGHTLV
WHQQTPDWFFQHSDGSPLDPNNPDDKQLLRDRLKTHIQTLVGRYAGKVYAWDVVNEAIDE
NQPDGYRRSEWYRILGPTPETGGIPEYIILAFQYARKADPDAKLFYNDYSTENPKKRQFI
YNMVKALHDRGLIDGVGLQGHINVDSPTVKEIEDTINLFSTIPGLQIQITELDISVYTSS
SQRYDTLPQDIMIKQALKFKELFEMLKRHSDRITNVTLWGLKDDYSWLSKDRNNWPLLFD
SNYQAKYNYWAIVEPSVLPVAINKGYANNAQPRIDGIMDKEYKGTIPLSILNDAGQDIAQ
VRALWSGNELCLYVTVNDSSVDANNDRVVIFIDQDNGKLPELKDDDFWVSISRNGTKNES
RTGHVKDYVVLQQLNGYTMEVKLLLNNSLAVNTNIGFDIAVIDNGQQYSWNDRTNSQYFE
TDNYGILTMADSVKFASAPKGTPKIDAELDDAWKNAQEIVTDTKVTVTGTVYDSAYAKAR
MMWDENCIYVYAVVYDPLLNKANTNPWEQDSIEIFIDENNHKTPYYEDDDVQYRVNYENT
QTFGTNGDAKNFITATKIIPNGYIVEAQVYMRTTKLSEGMVIGFDIQVNDADHTGRRVGV
LTWNDKVGNNWRDTTKFGCLELVAAPVQQPTTQQPSTPPSTSTTVTTVIIPATPVPSQQQ
TAQQQQTQQQQQTQQTQTAPQQQQKTEVSATQNQAIVKLEADKPATVALGQDIKVVISPN
AVTNKNATVKVEKVEKVSADIGFGVTIAPAVKIDVENGELVKAVPVEIKVDPISFKDDKI
PFAFVIDDTNKTSIVPVKKEANKMIVNTPKEGTIIIVAARLEDVYKDVTKTHWAYDTFKQ
AVTSGLVVGYNDMTLRPAKNVTLAEAAVIVQRAFEVQPKDAGKPANVPDWAASAVKALLD
NEIIAEVDDANKPLTRIQAVAIIMKVLENSGINVEPADIEFSDLYEQSSIDVEYLAKAYK
LGIVKGYPDGTFRPQNTITRAELLTLLFRALNSIKK
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaagtttgtagctttgattgttctgtttgtgtttttaatcagcattatagcc
ccatcgttaagtccattttcatatcaaagtgccagggcagaccagcaaaatcctgcagcc
agttatgtaaagttcgattttgaaaatggtacaactcagggctggggtccaagggggaat
agcacaactgttgagacagtttacaggatggcttatgagggcgattattctttaaaagtt
tctggtagaactgctgcatgggatggagcaattgttgatgttacatcaagtgtttcggta
aatactatgtacactgtgtcattgtttgtttatcacaatgatgtaaaaccgcagagattt
tcagtttatgcatatgtgaaagatagcagcggagaaaggtatataaaggtagctgataag
gtggttatgccacagtactggaaacagatatttggcaagtttacaatcacaacatcaaat
cccatccagagtgtaaaacttctcgtatgcgttccttcaaacagatcacttgaattttac
gcagacaatataatattgacatctgctcaaccggcatcgtccgggctggttaagtcttgc
aattttgaaagcggtagcactgatggctggcaggcaaggggaacgggttctgatgctcaa
atttctgtagttgatacagttgcacattcaggtagtaggagtttgtatgtattgggaagg
gctgatacatggcagggcgcacagatagacatgacaaacctgcttgagaaggggaaggat
tatcaattcagcatatgggtatatcagaacagtggaagtgaccaaaagataacccttaca
atgcagaggaagaatgcggatgatagtacaaattatgataccataaaatggcagcaaaca
gttccatctggggtttggacagaagtttctggttcatatacagtaccacagacagcaacc
cagctcatattctatgtggaatcgccaaatgcaacacttgacttttaccttgacgacttt
actgtaatagacaaaaacccacctgttgtaaatccgggtttggttaagtcttgcaatttt
gaaagtggtagcactgaaggctggcaggcaaggggaacgggttctgatgctcaaatttct
gtagttgatacagttgcacattcaggtagtaggagtttgtatgtattgggaagggctgat
acatggcagggcgcacagatagacatgacaaacctgcttgagaaggggaaggattatcaa
ttcagcatatgggtatatcagaacagtggaagtgaccaaaagataacccttacaatgcag
aggaagaatgcggatgatagtacaaattatgataccataaaatggcagcaaacagttcca
tctggggtttggacagaagtttctggttcatatacagtaccacagacagcaacccagctc
atattctatgtggaatcgccaaatgcaacacttgacttttaccttgacgactttactgta
atagacaaaaacccggttacaatacctgctgcggcaaaagagccagagtgggagattcca
tcactttgccagcaatacagccagtacttttcaattggtgttgcaataccatatagagtg
ctccaaaacccggtagaaagagcaatggttttaaagcatttcaacagtattactgctgaa
aatgagatgaagcccgatgctatacaaagaacagaagggcagttcaatttcgatgttgca
gaccagtatgttgactttgcacagagcaataatattggaataagaggacatacactggtt
tggcatcaacaaactccagattggtttttccagcactctgacggttcgccacttgatcca
aacaaccctgatgataagcagcttttaagagataggttaaagacacacattcagacactt
gtcggaagatatgcagggaaagtttatgcatgggatgttgtaaatgaagcaattgatgaa
aatcaaccggatggatataggagaagtgaatggtacagaattttaggaccaactccggaa
acaggcggaataccagagtatataatcctggcattccagtatgcacggaaagctgacccg
gacgcaaaacttttctacaacgattacagcactgaaaatccaaagaagaggcagtttatt
tacaacatggtcaaagctttgcatgatagaggtctcattgatggtgttggtctgcaggga
catattaatgtggattcgcctacagtcaaagaaatagaagatacaatcaatttgttcagc
acaataccgggtcttcaaattcaaataacagagcttgatatcagtgtatatacaagtagc
agtcagcgatatgacacattaccacaggatattatgattaaacaggctttaaaattcaaa
gagctgtttgaaatgttaaagcgccacagcgacagaatcacaaatgttacactttggggt
ctcaaagatgattattcatggctgtcaaaagatagaaataactggccactgctatttgat
agtaactaccaggcaaaatacaattactgggctattgtagaaccttcggtgctgcctgtt
gctataaataaaggatatgcgaacaatgcacagccaagaattgatgggattatggataaa
gaatacaaaggaaccattccgctttcgattttgaacgatgcaggacaggatattgctcag
gtaagggcactgtggagtggcaatgagctttgtctttatgtcactgtaaatgattcaagt
gtggatgctaacaatgatagggttgtaattttcattgatcaggacaatggaaagttgcca
gagttaaaagatgatgacttctgggtttcaatttcgagaaatggcacaaagaatgaatcc
agaactggccatgtaaaagattatgtagtgttgcagcaattaaatggatatacaatggag
gttaagctgcttttaaacaacagtttagcagttaacacaaatattggttttgatattgct
gtaattgataatgggcaacagtacagctggaatgatagaacaaactcacaatattttgaa
acagataattatggaattttaacaatggcagacagcgtaaaatttgcttcagcaccgaag
ggaacgccaaagatcgacgcagaattggatgatgcatggaaaaatgcacaggagatagta
actgacacaaaagtaacagtaacaggcacagtatatgactcagcatatgcaaaagcaagg
atgatgtgggatgagaattgcatctatgtatatgcagttgtctatgatccacttttgaac
aaggcaaacacaaatccctgggaacaggattctattgagatatttattgatgaaaacaac
cataagacgccttactatgaagacgatgatgttcagtacagagtaaactatgaaaatact
cagacatttggaacaaatggtgatgctaagaactttatcacagcaacaaaaataattcca
aatgggtatattgttgaagcccaggtttatatgaggacaactaaactctccgaaggaatg
gttataggttttgatattcaggtcaatgatgctgaccatacaggcagaagagtaggggta
ttgacctggaatgataaagtcggcaacaattggagagacacaaccaaattcggttgcttg
gagcttgttgctgcgcctgtacagcaaccaaccacacagcagccatcaacaccgccttca
acatcaacgacagtaacaactgttataataccagcaacaccggttccgtcgcagcagcaa
accgctcagcagcaacaaacacaacaacagcaacaaactcagcagacgcagacagcaccg
cagcaacagcaaaaaacagaggtgtcagctactcaaaaccaggcaattgtaaaacttgaa
gctgacaagccagcaactgtagccctggggcaggacataaaagttgttatttcaccaaat
gctgtaacgaacaaaaatgctactgttaaagttgaaaaagttgagaaggtaagtgctgat
ataggctttggtgtgacaattgcacctgctgtaaagattgatgttgagaatggtgaactt
gtaaaagctgtaccagttgaaataaaagttgatccgatttccttcaaagatgataaaatt
ccatttgcgtttgttatagatgatacaaataaaacctctattgtacctgtaaagaaagag
gcaaacaaaatgatagtaaatactccaaaagaaggtacaattattatagttgctgcaaga
ttggaagatgtttataaagatgtaacaaaaactcactgggcatatgacacatttaagcag
gcagtaacatccggtttagttgtgggctacaacgatatgacattaagacctgcaaagaat
gtgacacttgctgaagcagctgtgattgttcagagagcatttgaagttcaaccaaaggat
gctggtaaacctgccaatgtccctgattgggcagcttcagctgttaaagcactgcttgat
aatgagattattgcagaggttgatgatgctaataaaccgctgacacgaatccaggctgtt
gcaataattatgaaggtattagaaaattcaggaataaatgttgaacctgcggatattgaa
ttcagcgatttgtatgaacagtcatcaattgacgttgaatatcttgctaaagcatacaaa
cttggaattgtcaaaggatatccagatggaacattcagaccacagaacacaattacaaga
gcagagctgctgacactgctctttagagctttgaacagcataaaaaagtag
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