Caldicellulosiruptor morganii: OTK00_000968
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Entry
OTK00_000968 CDS
T08774
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cmor
Caldicellulosiruptor morganii
Pathway
cmor02024
Quorum sensing
cmor03060
Protein export
cmor03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OTK00_000968 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OTK00_000968 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OTK00_000968 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cmor02044
]
OTK00_000968 (ffh)
Enzymes [BR:
cmor01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OTK00_000968 (ffh)
Secretion system [BR:
cmor02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OTK00_000968 (ffh)
Eukaryotic Sec-SRP protein
OTK00_000968 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
AAA_31
Zeta_toxin
APS_kinase
cobW
Fer4_NifH
ParA
ResIII
AAA_30
AAA_33
nSTAND3
AAA_17
Thymidylate_kin
AAA_5
ATP_bind_1
Methyltransf_31
AAA_24
AAA_16
AAA_18
Mg_chelatase
ArsA_ATPase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WAM34723
LinkDB
All DBs
Position
1002765..1004096
Genome browser
AA seq
443 aa
AA seq
DB search
MFNSLSEKLQDVFKKLRGKGKLTEKDIKEAMKEVKLALLEADVNYRVVKDFINNVTQKAV
GNEVLESLTPAQQVIKIVYDEMVSLLGGNDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKL
AALLKKQGKKPLLIACDIYRPAAIKQLEVVAEKVGVSCYADYDKKDAVKIAVEGVNFAKS
NRFDVAIVDTAGRLHINEELMNELVSIKNTIKPTEILLVLDAMTGQDAVNVAEAFNNQLG
IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGMGEKMEDLEVFYPDRMASRILGMGDVL
TLIEKAQEAIDQKKAEELEKKLRNMEFTLEDFLDQLKQIKRMGPLSQIISMIPGVKIKGD
VDIDAGEKELKKIEAIINSMTKEERRNPGIINSSRKRRIALGSGTQVQDVNRLLKQFEDM
KRMMKQFSNPHIAKKGKFKFPFM
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatagtctttcagaaaaactgcaggatgtgtttaaaaagctaaggggcaagggt
aagctaacagaaaaagatatcaaagaggcaatgaaagaggtaaagcttgcccttctggaa
gcagatgtcaactacagggttgtaaaggattttataaacaatgtcacccagaaggctgtc
ggcaatgaggttttggagagccttacacctgcccagcaggtaataaagattgtgtatgat
gagatggtgagccttttagggggaaatgacacaaagcttaccttttctccgagtgggttt
tcaatctatatgatggttggcttgcagggttcaggcaaaaccacaactgcagggaaactt
gcagcgcttttgaaaaagcaggggaaaaagccgcttttgatagcgtgtgacatctaccga
cctgcggctattaaacagcttgaagtggttgcagaaaaggttggagtcagttgctatgcc
gattatgacaaaaaagatgctgtaaagattgctgttgagggtgtgaactttgcaaagtca
aacagatttgatgtagcaattgtagacacagcaggaaggcttcatataaatgaagaactg
atgaatgagcttgtcagtattaaaaatacaataaaacccacagagattttgcttgttttg
gatgccatgaccggtcaggatgctgtgaatgttgccgaggcgttcaataaccagctcgga
attgatggaattattatgacaaagcttgacggtgatacaagaggtggcgctgctctttct
gtcaaggctataacaggaaaacccatcaaatttgcaggaatgggcgaaaagatggaagac
ttggaggtattttatcctgacagaatggcatcaagaatactgggaatgggagatgtcctt
accttaattgaaaaggcacaggaagcaattgaccagaaaaaggcagaagaactcgaaaag
aagctcagaaacatggaatttacgcttgaggactttttagaccagctaaagcaaataaaa
agaatgggaccactttcacagataatttcaatgattccgggtgttaagataaaaggcgat
gttgatattgacgcaggtgaaaaagagcttaaaaagattgaggcaattatcaattccatg
acaaaagaagagcgaaggaatccgggtattattaattccagcagaaaaagaagaattgct
ctgggttcaggtactcaggttcaggatgtgaacaggcttttaaaacagtttgaagatatg
aagagaatgatgaaacaattttcaaatcctcatattgctaagaaaggaaaatttaaattt
cctttcatgtaa
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