Caldicellulosiruptor morganii: OTK00_000982
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Entry
OTK00_000982 CDS
T08774
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cmor
Caldicellulosiruptor morganii
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmor03009
]
OTK00_000982 (rimO)
Enzymes [BR:
cmor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OTK00_000982 (rimO)
Ribosome biogenesis [BR:
cmor03009
]
Prokaryotic type
ribosomal protein modification factors
OTK00_000982 (rimO)
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Ortholog
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
RIM2a_ZnF
CLP1_P
His_Phos_2
Motif
Other DBs
NCBI-ProteinID:
WAM34737
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Position
1015100..1016437
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AA seq
445 aa
AA seq
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MEEFDLVKIGFVSLGCNKNLVDSEIMMGACKKAGFEITPDAEDADVIVINTCGFINDAKQ
ESIDTILEMADYKKKKCKFLIVTGCLTQRYKDEILNEMPEIDAILGVKEMLKLPEVIKKL
YEGEGKIKVFDQQSTFIYTSSTPRVIATPAYYAYIKIAEGCNNRCSYCSIPLIRGSYVSR
HVDDIIREAEMLAQNGYKEIVLTAQDTTKYGLDIYNKKMLPDLLQRLSEIDNIKWIRFLY
SYPEDIDDNLLKVVKDNPKVVKYFDIPIQHINNRILRLMNRKTSSENIKELITRIRSAFD
EVVIRTTVLVGFPTESEDEFEELYEFVRWAKFDRLGAFAYSQEEDTPAANLPQVDDEKKI
KRYEKILNLQRKISLDQNRRRIGREYEVVIEGKDRNNFYIARSQFEAPEVDGKIIVFSRR
KLLPGEFVHVKILDAFEYDLVGEVI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatttgatttggttaaaattggatttgtttcactcgggtgcaataaaaatctt
gttgacagcgagataatgatgggtgcttgtaaaaaggcaggttttgagataacaccggat
gcagaagatgctgatgttattgttatcaatacatgtggttttatcaacgatgcgaagcag
gaatcaattgacactatactggagatggcagactacaaaaaaaagaagtgtaaatttttg
attgtaactgggtgtctcacacaacgctacaaagatgaaattttaaatgagatgccagaa
atagacgcaatacttggtgtcaaagagatgttaaaacttcctgaagtgatcaaaaagctt
tatgaaggtgaaggtaaaatcaaggtatttgaccagcaatccacatttatctatacaagc
tcaacaccgcgtgtcattgcaaccccggcatattatgcttacataaaaatagcagagggt
tgtaacaacagatgctcctactgttctattccgcttatcaggggaagttatgtgagcagg
catgttgatgatataatcagggaagcagaaatgcttgcacaaaacgggtataaagagata
gtgcttactgctcaggataccacaaagtatggtcttgatatatacaacaaaaaaatgtta
ccagatttgcttcagagactgagtgaaattgataacatcaagtggattcgttttttgtat
tcttatcctgaagatattgatgataatctgttaaaagttgtaaaagataatccaaaggtg
gttaaatattttgatattcccattcaacatataaacaacagaattttgaggctaatgaac
aggaaaacctcttcggagaatattaaagagctcattacaagaataaggtcggcatttgat
gaagtggtgataaggactacagttttggttgggtttccaacagagtcagaggatgagttt
gaagagctttatgagtttgtcagatgggcaaagtttgatagacttggtgcttttgcatat
tcgcaggaagaggacacaccggctgcgaatctgccccaggtagacgatgaaaaaaaaatc
aaaaggtatgaaaaaattttaaatcttcaaagaaaaatttcgcttgatcaaaacagaaga
agaattggcagggaatatgaagttgtaatagaaggcaaagatagaaacaacttttacatt
gcaagaagccagtttgaagcacctgaagtggatggcaagattatagtgttttcaaggcga
aagcttttgccaggagagtttgtgcacgtaaaaatcctggatgcttttgagtatgatttg
gtaggagaggtaatttga
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