Caldicellulosiruptor morganii: OTK00_001018
Help
Entry
OTK00_001018 CDS
T08774
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cmor
Caldicellulosiruptor morganii
Pathway
cmor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OTK00_001018 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmor03021
]
OTK00_001018 (rpoZ)
03400 DNA repair and recombination proteins [BR:
cmor03400
]
OTK00_001018 (rpoZ)
Enzymes [BR:
cmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OTK00_001018 (rpoZ)
Transcription machinery [BR:
cmor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OTK00_001018 (rpoZ)
DNA repair and recombination proteins [BR:
cmor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OTK00_001018 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
PBP5_C
Pcf11_helical
Motif
Other DBs
NCBI-ProteinID:
WAM34769
LinkDB
All DBs
Position
1045895..1046137
Genome browser
AA seq
80 aa
AA seq
DB search
MLLRPGLDELLQYVDNKYTLSVLVAKRARQLLELAQKRVDLNLNSDKYVTMAVNEIAAGK
ISYRYVNKHEKPVKKNEPKG
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcttcgacccgggcttgatgaacttttgcagtatgtggacaataaatatacactg
tctgtgcttgttgcaaagcgggcaagacagcttttagagctggctcaaaagagagtagat
ttaaatttgaattctgacaagtatgtaacaatggcagtaaatgaaattgctgctggaaaa
atttcttacaggtatgtaaacaaacatgaaaagccggtgaaaaagaatgagcctaaagga
taa
DBGET
integrated database retrieval system
