Caldicellulosiruptor morganii: OTK00_001020
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Entry
OTK00_001020 CDS
T08774
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cmor
Caldicellulosiruptor morganii
Pathway
cmor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OTK00_001020 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmor03400
]
OTK00_001020 (priA)
Enzymes [BR:
cmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OTK00_001020 (priA)
DNA repair and recombination proteins [BR:
cmor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OTK00_001020 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Cas3-like_C_2
AAA_19
PIF1
Zn_ribbon_6
DAP3
DUF2334
ATPase_2
DUF815
SRP54
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-ProteinID:
WAM34771
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All DBs
Position
1047358..1049526
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AA seq
722 aa
AA seq
DB search
MIAEVCINYQDANVDRTFDYLVPEHFKEFVEVGKRVYVAFGVSNRVVEGLIVNVKNDTNV
EKDKLKCILAVIDEIPVVSEEQIKLALSIKDYYALKLGQALELVIPPFVSNKEIYQISVQ
RTEHIDLEDEFLEVYNRIMKKPVLADSKFARENKEKIISLFLKGLLKYELRPLKDLEDKI
ENSLMQPHYTLTEEQNKALSTIKTAFDEGVYKNILLFGVTGSGKTEVYIQAMKYVVEKGK
SVILMVPEISLTPQMIERVKNRLNTDVVVYHSKMSSTQRQVAWLKLKNGKAKVIIGPRSA
IFAPAKEIGLIIVDEEHEPSYKSEKSPRINAVEVAQMRAKINSIPVVLGSATPTVEHYFW
AISGKYILCSLKNRINMKMPDVFVVDMKKELLEGNRSIFSRLLLSEIEKNLQRKEQVLLF
LNRRGYSPVVICRECGYVYMCKNCSISLTYHKTGYLKCHYCNYKEKYTGVCPKCGSKYMR
QYGSGTQKIEDEIKMYFRDAKVLRVDRDTTTRKNAIEEIFNKFKQKEADILIGTQMIAKG
LHFPDLTLVGVVNADTILNMPDFRSKERTFQLLTQVAGRAGREKQGRVIIQTFNPDDYSV
VAASKHDYDSFFKEEIKLRKTLEYPPYVYIVNFLVVSHSERYAKKGIENVYRLLEECSKT
TDAKIYGPSESPIFKVENQYRYHILVKFKKALQMIEVANKIKERYNYNNAELIIDINPWN
TL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgaggtatgtattaattatcaagatgcaaatgtggacaggacatttgactat
ctggtaccagaacattttaaagagtttgttgaagttggcaaaagagtttatgtagcgttt
ggagtttcaaacagagttgtggaaggtcttattgtcaatgtaaaaaatgatacaaatgtt
gagaaagataaattaaaatgtattcttgctgtaattgatgagattcctgttgtctctgaa
gagcaaataaagcttgcactttctattaaagattactatgctcttaaacttggacaggca
ttggagctggttataccaccttttgtaagtaataaagaaatatatcaaatttcggtacaa
agaaccgagcatatagatttagaagatgaatttttagaggtttacaatagaatcatgaaa
aaacctgttttagcagattcgaaatttgcaagagaaaacaaagaaaaaattataagttta
tttttaaaaggactgctaaaatatgaactgagacctttgaaagatttggaagataaaatt
gaaaactctttgatgcaaccacattatacgttgacagaggaacagaataaagctctgagt
acaataaaaacagcttttgatgaaggagtttacaaaaatattcttttatttggagtaacc
gggagcggaaaaacagaggtatatattcaggcaatgaagtatgtggttgaaaagggaaaa
agtgttattctgatggtgccagaaatttctcttactccccagatgattgaaagggttaaa
aacagattgaatactgatgttgttgtctatcatagtaagatgagcagcacacaaagacag
gttgcctggttgaagttaaaaaacggaaaagcaaaggtgataattggaccaagatcggct
atatttgctccagcaaaggaaataggtcttataattgtggatgaagagcatgaaccaagt
tataaatctgaaaaatctccacgcataaatgctgttgaagttgctcaaatgagagcaaag
ataaacagcatccctgtagttttgggttcggcaactccgacggttgagcattatttctgg
gctatttcgggaaagtatattttatgtagtttgaaaaacagaataaacatgaaaatgcct
gatgtatttgttgtggatatgaaaaaagaacttttagaagggaatagatctatcttcagc
aggttattgctatctgaaatagagaaaaatttgcagagaaaagaacaggttttacttttc
ttaaacagaagagggtactcacctgttgtaatatgtcgtgaatgtggttatgtttatatg
tgtaaaaattgcagcatctctttgacatatcacaagacagggtatttgaagtgtcattat
tgtaattacaaggagaaatatacaggtgtttgccctaagtgtgggagtaaatatatgcgc
cagtatggaagtggaactcagaaaattgaagatgagattaagatgtatttcagggatgct
aaggttttacgtgtggacagagataccactaccaggaaaaacgctattgaagaaattttc
aataagttcaaacagaaagaagctgatatacttattggcacacaaatgattgcaaaaggg
ctacactttcctgatctgactctggttggtgtggttaatgcagatactattttaaatatg
ccggattttagaagcaaagaaagaacatttcaacttcttactcaagtagctggaagagca
ggaagggaaaaacaaggaagagtgattatccagaccttcaatcctgatgattatagtgtt
gtggcagcatcaaaacatgactatgatagtttttttaaagaagagataaaactgcgaaaa
acattggaatatcctccctatgtatacatagtaaattttttggtggtgtctcacagtgag
aggtatgccaaaaaaggaatagaaaatgtgtatagattgcttgaagagtgttctaaaacc
actgatgcaaagatttatggaccaagtgagagcccaattttcaaggttgaaaatcaatat
agataccatatactggtaaaatttaagaaggctcttcagatgattgaggtggcaaataag
ataaaagaaaggtataattataataatgctgaactaataatagatataaatccctggaat
acactgtaa
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