Caldicellulosiruptor morganii: OTK00_001115
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Entry
OTK00_001115 CDS
T08774
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cmor
Caldicellulosiruptor morganii
Pathway
cmor03030
DNA replication
cmor03410
Base excision repair
cmor03420
Nucleotide excision repair
cmor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OTK00_001115 (polA)
03410 Base excision repair
OTK00_001115 (polA)
03420 Nucleotide excision repair
OTK00_001115 (polA)
03440 Homologous recombination
OTK00_001115 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmor03032
]
OTK00_001115 (polA)
03400 DNA repair and recombination proteins [BR:
cmor03400
]
OTK00_001115 (polA)
Enzymes [BR:
cmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OTK00_001115 (polA)
DNA replication proteins [BR:
cmor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OTK00_001115 (polA)
DNA repair and recombination proteins [BR:
cmor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OTK00_001115 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OTK00_001115 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
CABIT
MptE-like
Motif
Other DBs
NCBI-ProteinID:
WAM34859
LinkDB
All DBs
Position
1145928..1148477
Genome browser
AA seq
849 aa
AA seq
DB search
MKFVIFDGNSILYRAFFALPQLTTSTGIPTNAIYGFLNVLLKYLDSEKPDYVAVAFDKKG
RAARKSEYEEYKANRKPMPDSLQVQIPYVREILAAMNIPVLECEGYEADDVIGTLVNRFK
AWDLEIVIITGDRDTLQLLDKNVIVKIVTTRFDRTTKDLYTVENVKEKYGVFAHQVVDYK
ALVGDASDNIPGVKGIGDKTAIKLLEEYQTLENIYQNLNNIKGSLKEKLEAGKDMAFLSK
RLATIICDLPIEVNLEELKTKEWDKERLYQILLQLEFKSFIKRLGFSEEINYARQNFQLP
EFSIKELRDVSEIEGKEIYLLYSDEEGLFYIYDHQTSTIFTTSDKEAIKDLLTVQSIQKV
VYDLKNILHKVDFDEANQIKNCNDVMLASYVLDSTRSSYDLETLFISYLNTDIAAIKENR
WAGATVLLRNLWDELSKLIDLNSAQYVYESIEMPLVPILYEMEKIGFKVDKNTLQEYTKE
IESKLLKLESQIYQIAGEWFNINSPKQLSYILFEKLKLPVVKKTKTGYSTDAEVLEELYD
KHDIIPLILDYRMYTKILTTYCQGLVQAINPATGRIHTNFIQTGTATGRLASAEPNLQNI
PVKYDEGKLIRKAFVPDKGYVLIDADYSQIELRILAHISEDERLINAFKNNLDIHSQTAA
EIFGVDISQVTPIMRSQAKAVNFGIVYGISDYGLSRDIKISRKEAAEFINRYFEKYPRVK
EYLDNVVKFARENGFVLTIFNRKRYIKDIKSTNKNLRNYAERIAMNSPIQGSAADIMKIA
MIRVYKKLKENNLKSRIILQVHDELLIESPYEEKEIVKEIVKSEMENAVLLKVPLVVEVK
EGSNWYETK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttatttttgatgggaatagtattctgtatagagctttttttgccttgcca
cagcttactacctcaacaggcatacctacaaatgctatatatggttttttgaatgtgctg
ttgaaatacttagattctgaaaaaccggattacgtagcagtggcttttgacaaaaaggga
agagctgcccgaaaaagtgaatatgaagaatacaaggctaacagaaaaccaatgccagat
tctcttcaggttcagataccttacgtaagagaaatacttgctgctatgaacattcctgta
ttagaatgtgaagggtatgaagctgatgacgttataggcacacttgtaaatagatttaaa
gcctgggatttagagattgtgataataaccggagacagagatacacttcagttacttgat
aaaaatgtaattgtcaaaatagtcacaacaaggtttgacaggacaactaaagatttgtat
actgtagaaaatgtcaaagaaaaatatggtgtttttgcgcatcaggttgttgactataaa
gcgttagtaggtgatgcgtcagacaatataccaggtgttaagggaattggagataaaact
gctataaagctgttagaagagtaccagactctggagaatatatatcagaatctaaataac
attaaaggatcgctaaaagagaagttagaggcaggaaaagacatggcatttttatcaaaa
agactggctactatcatatgcgacttaccaattgaggtgaatcttgaagaattaaaaacc
aaagaatgggacaaagaaagactttatcagattttacttcaacttgagtttaaaagcttt
attaaaagactgggcttttcagaagagattaactatgcaaggcagaactttcagctacct
gaatttagtattaaagaacttcgtgatgtttcagaaatagaaggcaaagaaatctatcta
ttgtactcagatgaagaaggacttttttatatttatgaccatcaaacctcaaccattttt
acaacttctgataaagaagctattaaagatcttttaacagtccaaagcattcaaaaggtt
gtatatgatttaaaaaatatactccataaggtggactttgatgaagctaatcagataaaa
aattgtaatgatgttatgttggcttcatatgttttggacagtacacgcagttcgtacgat
ttggaaacattgtttatttcttatctcaacactgatatagctgcaatcaaagagaataga
tgggctggtgctactgttttattaagaaatctttgggatgaactttcaaaactcattgat
ttaaactcggcacaatacgtttatgaaagcatagagatgcctcttgttcccattttatat
gaaatggagaaaatcggttttaaggttgataaaaacactttgcaggagtatacaaaagag
attgagagcaagcttttaaagctggaatcacagatttatcaaatagccggtgaatggttt
aacataaactcgccaaaacaactctcatatatattattcgaaaaactgaagcttccggtt
gttaaaaagaccaaaacaggatattcaacagatgccgaggtattggaagagctgtatgat
aaacatgacataataccgcttattctggattatagaatgtatacgaaaatactgacaact
tactgtcaggggctggttcaggcaataaatcctgcaactggaaggattcataccaacttt
attcagacaggtacggcaactggaagacttgcaagtgcagagcccaatctgcaaaatatt
cctgtaaaatatgatgagggaaagctaataagaaaggcatttgttccagataaaggttat
gtgttgatagatgctgattattctcagattgagcttagaatacttgcacatatctctgag
gatgaacgactgataaatgcctttaaaaataaccttgatattcattcacagacggcggca
gagatctttggtgtggatataagtcaggttacaccaattatgcgaagccaggcaaaagca
gttaactttggaattgtatatggtatatctgattatggactttcacgggatataaagatt
tcaagaaaagaggcagccgagtttattaatcgttattttgaaaagtatcccagagtaaaa
gaatatttggacaatgttgtcaagtttgcccgtgaaaatgggtttgttttgacaatattt
aacaggaaaagatatattaaggatataaaatctaccaataaaaacctgagaaactatgca
gagagaatagcaatgaattcacctatccagggaagtgctgcagatattatgaaaatagca
atgataagagtttataaaaagctaaaagaaaacaatttaaaatcaagaattattctgcag
gtccatgacgaacttttgattgaatcaccctatgaagagaaagagatagtaaaggaaata
gtaaaatcggagatggaaaatgcggttttgttgaaagttcctttggtagttgaagtgaaa
gaaggttcaaattggtatgaaacaaagtaa
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