Caldicellulosiruptor morganii: OTK00_001344
Help
Entry
OTK00_001344 CDS
T08774
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmor
Caldicellulosiruptor morganii
Pathway
cmor03420
Nucleotide excision repair
cmor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OTK00_001344
03430 Mismatch repair
OTK00_001344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmor03400
]
OTK00_001344
Enzymes [BR:
cmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OTK00_001344
DNA repair and recombination proteins [BR:
cmor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OTK00_001344
MMR (mismatch excision repair)
Other MMR factors
OTK00_001344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
LPD3
DEAD
MREG
Motif
Other DBs
NCBI-ProteinID:
WAM32892
LinkDB
All DBs
Position
complement(1372755..1374899)
Genome browser
AA seq
714 aa
AA seq
DB search
MEWLKELNQQQLEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLAKPGNILAITFT
NKAADEMKERIKKLVGIESFSEMWISTFHSACARILRMEAHSIGFSNNFVIFDMQDRHQL
LKECFEKLNIDQDRLELRYVSRQISNFKNMLISPSDTHKMGDVDPRIVEIYRLYNKLLKE
YNALDFDDLIYHTITLFRTNPDILERYQQKFKYILVDEYQDTNDAQFKLIYLLAQKHRNI
CVVGDDDQSIYSFRGANVRNILEFENVFSDAKVIKLERNYRSTKTILSVANEVIKNNTSR
KEKKLWTENNEGEKIYLYTAFDEIDEANFVSMSIKNLIQSGVKPSEIGILYRTNAQSLNF
ENALSSHAIPYKVVGSLRFFERKEIKDIIAYLRLVTNPHDNLSLFRIINVPKRGIGPGTV
EKIKVLSDEYGISAYSLLKERGAMEFDRRTYLKLNEFIFLLEDIRAEADSKSVVEVIKLV
LDKTKYMETLLSSKNEEDFQRVKNLEQLISAAAVFEEENEDKSLQNFLNSITLSFEEDEA
QKEDRVLLMTIHAAKGLEFDVVFLTGLEEGLFPLLRAEDINGMKEELEEERRLCYVAITR
AKKFLVLTYANNRRVFGRFSSRQRSCFLDEIPANYIQQVYTPLRKINFSDMSFNENQQSV
TKDSLAVGDIIQHNRFGIGKVLSLSEDLNEVLIEFENYGQKRLLLSYANLRKIG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaatggctgaaggaattaaaccagcaacagttagaggcggttctttctacagaagga
ccgcttttagtattggcaggagcaggttcagggaagacaagagtaataacatacagaatt
gcatatatattgaatatgggattggcaaaaccaggtaatatactggctataacatttact
aacaaagcagcagatgaaatgaaagaacgtataaaaaaacttgtaggcatagagtctttc
tcagagatgtggatatccacttttcactctgcgtgcgcaaggatacttagaatggaagca
catagcataggattttcaaacaattttgtaatatttgatatgcaggatagacatcagtta
ttaaaagagtgttttgaaaagctaaatatagaccaggacagacttgaactcaggtatgtg
tcaagacagatcagtaatttcaagaacatgctaatatctccatcagatacccataagatg
ggagatgtagatccacggattgttgaaatttacaggctctataacaaacttttaaaagaa
tataacgcgcttgactttgacgatcttatttaccatacaataactctttttagaacaaac
ccggatatcttggaaagataccagcaaaagtttaaatatatcttggttgatgaatatcaa
gatacaaatgatgcacaatttaagttaatttatttgcttgcacaaaaacatagaaatatc
tgtgttgtgggagatgatgatcagagtatttatagcttcagaggagcaaatgtaagaaat
attttagagtttgaaaatgtgttcagtgatgcaaaagtgataaagcttgaaagaaattac
cgttctaccaagacaatcttgtctgtcgccaatgaagttattaaaaataatacttcccga
aaagaaaaaaaactctggacagaaaataacgaaggtgaaaaaatttatctttatacagca
tttgatgaaattgatgaggcaaattttgtatcaatgtcgataaaaaatcttattcaaagt
ggagttaaaccatctgaaatagggattctttatagaacaaacgctcaatcgttaaacttt
gagaatgctctttcgtctcacgctataccttataaggttgtgggaagtttaaggtttttt
gaaaggaaagagataaaggatataattgcatatttgaggcttgtgaccaatccgcatgac
aatttgagtttgttcagaataataaatgttcccaaaagaggaataggtccaggcacagtt
gagaaaataaaggttttaagtgatgagtatggaatatctgcttacagcttattaaaagaa
agaggagctatggagtttgacagacgaacatatctcaagttaaatgaatttatttttctt
ttagaagatatcagggctgaagctgattcaaaatctgtggttgaggtaataaagcttgtt
ctggataaaacaaaatatatggaaactctactttcaagcaagaacgaagaggatttccag
agggtaaagaatctggaacagctaatcagtgcggccgctgtattcgaagaagaaaatgaa
gacaaaagcctgcagaactttttaaattctattactctgagctttgaagaagatgaagct
caaaaagaagacagggttttgttgatgaccattcatgcagcaaaggggcttgagtttgat
gttgtattcttaaccggacttgaagaaggactgtttcctcttttgagagcagaggacata
aatgggatgaaggaagaacttgaagaagaaagaagactttgttatgttgcaataacaagg
gcaaagaagtttttggtgttgacttatgcaaacaacagaagagtttttggtagattttca
tcaagacagaggtcgtgttttcttgatgaaattcctgcaaattatattcagcaggtttat
acaccgctgaggaaaataaatttttctgatatgagttttaatgaaaatcagcaaagtgtt
acaaaagattctttggctgttggcgatataattcagcacaacagatttggtattgggaag
gtattatctttgtcagaggacttaaatgaggtattaatagagtttgaaaattatggtcaa
aagagattgcttttgtcatatgcaaatctcagaaagattggttga
DBGET
integrated database retrieval system
