Caldicellulosiruptor morganii: OTK00_001368
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Entry
OTK00_001368 CDS
T08774
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cmor
Caldicellulosiruptor morganii
Pathway
cmor03030
DNA replication
cmor03430
Mismatch repair
cmor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OTK00_001368
03430 Mismatch repair
OTK00_001368
03440 Homologous recombination
OTK00_001368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmor03032
]
OTK00_001368
03400 DNA repair and recombination proteins [BR:
cmor03400
]
OTK00_001368
Enzymes [BR:
cmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OTK00_001368
DNA replication proteins [BR:
cmor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OTK00_001368
DNA repair and recombination proteins [BR:
cmor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OTK00_001368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
tRNA_anti_2
At5g48480-like_N
Motif
Other DBs
NCBI-ProteinID:
WAM32915
LinkDB
All DBs
Position
complement(1394185..1397610)
Genome browser
AA seq
1141 aa
AA seq
DB search
MSFVHLHVHTEYSLLDGAVRIESLFERVKQLNMQSIAITDHGAMYGVVEFYKVAKEHGIK
PIIGCEVYISPRSRFDKEPNIDNDIHHLILLAMDNEGYKNLSKIVSLGFIEGFYYKPRVD
REILSKYSKGLIALTSCLAGEIPKLILRDQKEKLIDAISFYKDTFGSNFYFELQYHGIDE
QRFVNSELIRLSKKYQIPLVATNDVHYLKKEHRELHDILLCIQTGKTIHDSNKMEFPTDE
FYLKSPEEMERIFGYVPEALKNTLEIAERCNVEFEFGKINLPKFQLPEGESDAFEYLKEL
ALSGFEKRYSKDNKMAYDRLLMELGVIKDMGFTEYFLIVQDFINFAKKNNIMVGPGRGSA
AGSIVAYCLGITNVDPIKYNLLFERFLNPERISMPDIDIDFCYQRRQEVIDYVTNKYGKD
RVSQIITFGTMAARASIRDVGRALGIPYAQVDEIAKMIPFSPGMTIDKALEINYDLKKLY
DQNDTVRKIIDTARNLEGMPRHTSVHAAGVVISNCPITELVPLARTEDAIVTQFPMTTLE
ELGLLKMDFLGLRTLTVIQNTLELIKKHRNIEIDLDRIDYNDKNVYQFISEGNTNGVFQL
ESSGMKQFMRELKPENLEDVIAGISLFRPGPMDQIPVYIQNKNNKERIEYLHPKLEPILN
VTYGCIVYQEQVMQIFRELAGYSLGRADLVRRAMAKKKADILMEERDRFIEGAVAGGVDR
HIAEKIFAIIEDFGSYAFNKSHAAAYAILAYQTAYLKRYFTIEFMTSLITSVMNSNEKVG
MYIEECRRFGISVLPPDINRSSYDFTIEGNSIRFGLRAIKSLGENVISHILKEREQNGEF
KDLYDFIMRVDTNTVNKRIIENLIKSGAFDFTKINRNSLLASVEDILTIKQSQKKNANQV
TFFEIANNEIELFSYKNLPQPSPEELLQMEKDAIGIYISGHPLEKYADLISKYNIVNLAE
LSNMTEEEEYKYQQIIVCGVLKEVKIKLTKNNQTMAFAKLEDLTDSLEVLFFPSVYERYS
HLIKEDSILLIEAKATYREDEGVKIIAQKIDRLGEKEAGLSSTKQSNKAIAIKTDDHSIL
KSKKFVSFIKFFTGNSKIILYYRQKRLVSKSNMCININDTVLEQLKEWFGEENVWLEDLD
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtacatcttcatgtacacacagagtatagcttgcttgacggagctgttcgg
atagagagtttatttgagagggtaaaacagctcaatatgcaaagtattgcaataactgac
catggagcgatgtatggggttgttgaattttacaaggtagcaaaagaacatgggataaag
ccaataatcggatgtgaagtatatatttctcctcgttcgcgttttgataaagaaccaaat
attgataatgatattcatcatttaatacttcttgcaatggataatgagggatataaaaac
ctttcaaagattgtttcactggggtttattgaaggattctattataaaccaagggtggac
agggaaatcctttcaaaatattcaaaaggtttaattgcactgacaagctgtcttgctgga
gagatacccaaattgattttgagagaccaaaaagaaaaattgattgatgcgatcagtttt
tacaaagatactttcgggagcaacttttattttgaacttcaataccatggaattgatgaa
caaaggtttgtaaatagtgaacttatcagactttctaaaaaataccaaattcctcttgta
gcaacaaatgatgtgcattatctgaaaaaggaacatagggaacttcatgacattctgctt
tgtattcagacaggaaaaacaatacatgatagcaataaaatggagtttcctacagacgag
ttttatctcaaatctcccgaggagatggaaagaatatttggttatgttccggaggcactc
aaaaacactctggagattgctgaaaggtgtaatgttgaatttgaatttgggaaaattaac
cttcccaaatttcaactaccagaaggagaatctgatgcgtttgaatatctcaaagagttg
gcactgtccggttttgaaaaaagatattcaaaagataacaaaatggcatatgacaggctt
ttaatggaacttggtgtaataaaggatatgggctttacagaatactttttgattgttcag
gattttataaactttgcaaagaaaaataatataatggtaggacccggtagaggttctgcg
gcaggaagcatagttgcgtattgtcttggaattacaaatgttgatccaattaaatataat
cttctttttgaaaggtttttaaatcctgaaaggatttccatgcctgatattgacattgat
ttttgctatcagcgaaggcaggaagtaattgattatgttaccaacaaatatggtaaagac
agggttagccaaataataacatttggtacaatggcagcaagggcctctataagagatgtg
ggaagggctcttggcataccatatgcccaggttgatgaaattgcaaagatgataccattt
tcacctggtatgacaattgacaaagcacttgagataaattatgaccttaagaaattatat
gatcaaaatgatactgtcagaaaaataattgacactgcaagaaatcttgaaggaatgcca
cggcacacttcggttcatgcagcaggagttgttatatcaaactgtccaattaccgaactg
gttcctctggcaagaacagaggatgctatagttactcagtttccgatgactacattggaa
gagctgggacttttgaaaatggattttctgggtttgaggactcttacagttattcaaaac
actttagagcttataaaaaaacatcggaacatagagattgatcttgacagaattgactac
aatgataaaaatgtttatcaatttatttctgaaggaaacacaaatggagtattccagctt
gaaagcagtggcatgaaacagttcatgagagaattaaaaccagagaatttggaggatgtg
atagccggaatttctcttttcagaccaggtccaatggatcagattccggtgtatatccag
aacaaaaataataaggaaaggatagagtatctgcatccaaagcttgaaccaattttgaat
gttacgtatggatgtatagtttaccaggaacaggttatgcagatctttagagagcttgca
ggttattcacttggcagagcagaccttgtcaggcgcgcaatggcaaagaaaaaggcagat
attttgatggaagagagagatagattcattgaaggagctgtagcaggtggggttgacaga
cacatagcagaaaagatatttgcaataattgaggactttggaagctatgcgtttaacaag
tctcatgcagcagcctatgctattttggcgtatcaaacagcttatttgaagaggtatttt
accattgagtttatgaccagcttaattacaagcgtaatgaattcgaatgagaaagttgga
atgtacatagaagagtgtagaagatttggaatttcggttcttccacccgatataaacaga
agtagctatgacttcacaatcgaggggaatagtatcaggtttggtttaagagcaataaag
agcctgggtgaaaatgtgatttctcatattttaaaagagcgtgaacaaaatggagagttt
aaagatttgtatgactttataatgagagtggatactaatacagtgaacaaaagaattatt
gagaacttgataaaaagtggagcttttgattttacaaaaataaacaggaattcactttta
gcttctgtggaagatattctcacaatcaaacaatcacaaaagaaaaatgcaaatcaagtt
acgttttttgaaatagctaacaatgaaatagagcttttttcatacaaaaaccttccccag
cccagtcccgaggaacttttgcagatggaaaaagatgcaatagggatttatataagtggt
catccactggaaaaatatgcagatttgatttctaagtacaacattgtgaatctggctgaa
ctttctaatatgacagaggaggaagagtacaagtaccagcagataattgtatgtggagtg
cttaaagaggtaaaaataaaactgaccaagaacaaccaaacaatggcatttgcaaaactg
gaggatttaactgattctttggaggttcttttctttccaagtgtttatgaaaggtattcg
cacttgataaaagaagattcaattttattgatagaggcaaaagctacatacagagaagat
gagggagtaaagattattgcacagaaaatagatagacttggtgaaaaagaagctggatta
tcttctacaaaacagtccaataaagcaatagcaataaaaacagatgaccattctatttta
aaatccaaaaagtttgtatcttttatcaaattctttacaggtaattccaaaattattctt
tattacaggcaaaaaaggcttgtttctaaatcaaatatgtgcataaatataaatgacact
gtacttgagcaattaaaagagtggtttggcgaggaaaatgtatggcttgaagatttagat
tcttga
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