Caldicellulosiruptor morganii: OTK00_001428
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Entry
OTK00_001428 CDS
T08774
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cmor
Caldicellulosiruptor morganii
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmor03016
]
OTK00_001428 (truA)
Enzymes [BR:
cmor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
OTK00_001428 (truA)
Transfer RNA biogenesis [BR:
cmor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OTK00_001428 (truA)
Prokaryotic type
OTK00_001428 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
56B_RHH
DUF2344
Motif
Other DBs
NCBI-ProteinID:
WAM32972
LinkDB
All DBs
Position
complement(1453329..1454063)
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AA seq
244 aa
AA seq
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MRNILLTIEYDGTNYFGWQRQPNKKTIQGVIEEAIKNITGEKVNLVGSGRTDAGVHALAQ
KANFKTASKIPVEKFPFALNSVLPNDISIKDAIEVSLEFSARYSAKQKTYKYLIYNHRTR
PAILRNYAYYFPYDLDIVSMQRSCEYFIGEYDFSSFCSSGSETSSKVRKIFDCYLTFENE
CIAIYITANGFLYNMARIIAGTILDVGAGRIKPTDIPLIIESKDRTRAGKTLPPWGLYLV
DVIY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaatattcttctaacaattgaatatgatggaacaaactattttggatggcagaga
cagcccaataagaaaacaatacagggtgttattgaagaggcgataaaaaatataactgga
gaaaaggtaaaccttgtggggtcaggtcgtacagatgcaggagtacatgctcttgctcaa
aaggcaaattttaaaacagcaagcaaaatcccagtagagaaatttccttttgcgctcaat
tcagttcttccaaatgatatttcaatcaaggatgcaattgaggtttcgcttgagttttca
gcacgctacagtgcaaagcaaaagacttacaagtatctcatttataatcacagaacaaga
cctgccattttacgaaattatgcttattactttccatatgatcttgatatagtctcaatg
caaaggtcctgtgagtattttataggtgagtatgacttcagtagcttctgctcaagtggc
agtgaaacaagctcaaaggtgcgtaaaatttttgattgttatctgacatttgagaatgaa
tgtattgccatatacattacagcaaatgggtttctttacaatatggcaagaataattgct
gggacaattttggatgtgggtgctggcaggataaaacccactgacattccacttataata
gagagcaaagatagaacaagagccggtaaaactcttccaccatgggggctttatcttgta
gatgtcatttactga
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