Entry |
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Name |
(GenBank) SMC family ATPase
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
cmor Caldicellulosiruptor morganii
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Brite |
KEGG Orthology (KO) [BR:cmor00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cmor03400]
OTK00_001569
DNA repair and recombination proteins [BR:cmor03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OTK00_001569
Archaeal homologous recombinant proteins
OTK00_001569
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(1570748..1573321)
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AA seq |
857 aa
MKPLFLKIENFKSYGESQNEIDFSNIKVACIVGRNGNGKSSVAEAIAWALFGEFERLQTG
KRGKISETEYINTNKDYMQVEFEFEMDGIIYRVVRRLDRRGKKYLSLFIKKNDVLIPITE
ANYTQTQNRLEKILGIDFNVFLHSAYLSQKRTEDFLLSSPENRREILAKILNLSIYDRIN
DLARERRKEKKVLLEIKAGEYEENIKIASEQDSIKNVISDLEQRSKEITAKLDIVKNDLN
NLMNQKYQTEQVIKDIRRKKGEKDEYEKKLNEIRKKIESAKNELLRIENDLKNQHEITAK
ACEYEQLKSILDVLQKDYERYISLKNDIALIEKEKNSKEEQKKIFEKSVEEYRLKISGET
AELSKYQQELESLKGEISGIEKDLEEIKNFKSQLDSKKEEAAKYEKALEVVESKLKELAT
SYRLIESNKGKCPVCLREIKGEEEKEHIKREIATQGKEYKEKKEKLGEELSKLKKDIEQL
EQKVKQEDILRSKEKRLHGLFENLKAKIDQKYKNIESLQNSIKQSQEKIYTFDAEVIELT
KKLQDLNNKLYQLNFDEANYKRVFQKAKELEVYLKLLKEIEIKKVKAENLKKNLNEYQNE
ALQLQKKLEEIEKDILQMSSNSPEEKLKEIQTSINGYEAKVKELEAKLSSTMKEMGIFEQ
RLEQAKQAEQKVTSLEKEIEELKKEIEIYDIIIDVTGPDGIKNEIIANTLPLIRDEANRL
LKLLTDGAFSIDFKTQKETASGKTIETLQIEISDINGTRNYELFSGGELFRINFAIRIAL
AKVLLKRAGASIRMLILDEGFGSQDEEGKDHIIECLNQIKDQFDTILVITHIEDLMDAFD
QRIVVKKDMEGSKIFIV |
NT seq |
2574 nt +upstreamnt +downstreamnt
gtgaagccgctttttttgaagattgagaactttaaatcttacggagaaagtcaaaatgag
atagattttagcaatataaaagttgcatgtattgttggtagaaacggcaacggtaaatct
tcggttgcagaagccattgcatgggcactttttggcgagtttgaaagacttcagactggc
aagcgtggaaaaatctctgagacagagtatataaatacgaataaagactacatgcaggtt
gagtttgagtttgagatggatggtataatatacagggttgttagaaggcttgacagaaga
ggcaagaaatatctttcactttttattaagaaaaatgatgtgctcattcccataactgaa
gcaaattacactcagacacaaaacaggcttgaaaagatactgggtattgattttaacgtc
tttttgcactctgcatacctttctcagaaacgaacagaggactttttgctgtcctctccg
gagaacagacgggagattctggcaaaaatcttgaacctcagcatatatgaccggataaac
gatcttgcaagggagaggagaaaagaaaagaaggtattgcttgaaataaaagcaggagaa
tatgaagaaaatattaagattgcttctgaacaggacagcatcaagaatgttatttcagat
cttgagcaaagatcaaaagaaatcacagctaagttagatattgttaaaaatgatctcaac
aaccttatgaatcagaagtaccagacagagcaggttatcaaagatataagaagaaaaaag
ggagaaaaggatgaatatgaaaagaaacttaatgagatcaggaaaaagattgaaagtgct
aaaaatgagcttttgagaatagaaaatgatcttaaaaaccagcatgaaataactgcgaaa
gcctgcgagtatgaacagctgaaatctattttagatgttttgcaaaaggattatgaaagg
tatatatcactcaaaaatgatatagcgcttattgaaaaagaaaaaaatagcaaagaggaa
cagaagaagatatttgaaaaatctgtggaagaatatagattaaaaatctcaggtgagaca
gctgaactttcaaaataccagcaggagctggagagtttaaaaggggaaatatcaggtatt
gaaaaggatcttgaagaaataaaaaatttcaaatcccagttggactcaaaaaaagaagag
gctgctaaatacgaaaaagctctggaggttgtggagagcaaacttaaagaacttgcaaca
agctacagattaattgagtcaaataaaggtaaatgtcctgtatgtttgcgtgaaataaag
ggtgaagaggaaaaagagcacataaaaagggaaatagcaactcagggaaaagaatacaaa
gaaaagaaagaaaagctgggtgaagagctgtcaaagctcaaaaaagatatagaacagctt
gaacagaaggtaaagcaggaggatattttgcgttcaaaggagaagagacttcatgggctt
tttgaaaacttaaaggcaaagatagatcagaaatataaaaatatagagagtttgcaaaac
tccataaagcagagtcaggaaaagatatatacttttgatgctgaggtaattgaacttaca
aaaaaacttcaggatttgaacaataagctctatcaactgaactttgatgaagcaaattac
aaacgcgtttttcaaaaagcaaaagagcttgaggtgtatttgaaacttttaaaggagata
gagataaagaaggttaaagcagaaaatcttaaaaagaatctcaatgaatatcaaaatgaa
gctttgcagcttcaaaagaagcttgaagagatagaaaaagacattttgcagatgtcttct
aattctccggaagagaagctgaaagaaatacagaccagtataaatggctatgaggcaaag
gtaaaagagcttgaagctaaattgtcttccacaatgaaagaaatgggtatttttgagcaa
agacttgaacaggcaaaacaggcagaacaaaaagtaacttcgcttgagaaagagattgaa
gagctgaaaaaggagatagagatttacgatatcatcattgatgtaaccggtcctgatggg
ataaagaatgagataattgccaacactctgccgcttatcagagatgaagcaaacaggctt
ttaaagctcctgacagatggtgctttttcaattgactttaaaacacagaaagagacagct
tccgggaaaacaatagagacccttcaaatagagatttcggatataaacggtacaaggaac
tatgagcttttttcgggtggcgaacttttcaggatcaactttgcaatcaggatagcgctt
gccaaagtgcttctgaaaagagccggtgcttcaatcaggatgctaatcttagacgagggc
tttggttcacaggatgaagaagggaaagaccatataatagagtgcttgaaccagatcaag
gaccagtttgatacaatacttgtgataactcatatcgaagatttgatggatgcatttgac
cagagaatagttgtaaaaaaagatatggaagggtccaaaatttttattgtataa |