Caldicellulosiruptor morganii: OTK00_001570
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Entry
OTK00_001570 CDS
T08774
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cmor
Caldicellulosiruptor morganii
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmor03400
]
OTK00_001570
DNA repair and recombination proteins [BR:
cmor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OTK00_001570
Archaeal homologous recombinant proteins
OTK00_001570
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GFIT
Motif
Pfam:
Metallophos
Metallophos_2
RM8_Med14
Motif
Other DBs
NCBI-ProteinID:
WAM33101
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Position
complement(1573345..1574598)
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AA seq
417 aa
AA seq
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MPVKGVHTADLHFGVTTYSRETPDGLGSRVHDFFRTFDRILDYIRKENINLLLITGDIFK
DREPNSTLRNMFYKRIVEIAREGVLVVIVPGNHDMHPFETRHHTVKVFEIFNQENIVVMD
KFFETKVFKINQEKIRIIAVPYLYLERFIDRTIEKIDQLEQNIANFFEKKLTEVLDSCDD
DIPTILAGHFAVSEAEIGSERMIMVGKEVKVPLSVLLNPRLKFVALGHIHRTQVLHSENP
AVLYCGSPDRIDFSEAQDQKGFVVFEIDKDNFWFGFQPVVTRPFYQLEIDLFEPDGDVNR
IILSELERKIKTLEESHGNVKTSVLKLTIKTQSLLKEKINLKSIEEHLKENCFILAPVEV
QILDTRKDFRIADVDEKSDPVFAFERYLSASQKYKDIKNKNEVVTVFKTLLDEVKES
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaaaaggtgttcacacagcagatcttcatttcggtgtgacaacatacagcagg
gaaactcccgacgggcttggttcacgtgttcatgattttttcagaacgtttgacaggatt
ctggattatataagaaaagagaatataaatcttttgttaattacgggtgacattttcaaa
gacagggaaccgaattccactttgaggaatatgttttacaaaaggattgttgagattgcc
agagaaggagtactggttgtaatagtgccggggaatcatgatatgcatccgtttgaaaca
agacatcatacagtaaaggtttttgagatattcaatcaggaaaatattgttgtgatggat
aaatttttcgaaacaaaggtatttaagataaaccaggagaaaataaggattatagccgta
ccttacctttaccttgaaagatttattgacaggacaattgaaaagattgatcagcttgaa
cagaacatcgccaatttctttgagaaaaaattgacagaggttctggattcatgtgatgat
gatatacccacaatcctggcaggacattttgcggtcagcgaagcagagattggcagcgaa
agaatgattatggtagggaaagaggtaaaagtgccactttctgtgcttctaaatccaagg
ctcaaatttgttgcacttgggcacatccacaggacgcaggttttgcactctgaaaacccg
gcagttttgtactgcggatcacctgacaggatagacttttcagaagctcaggaccagaaa
ggatttgtggtgtttgaaatagataaagacaatttttggtttggctttcagcctgttgta
acaagaccattttatcagcttgagattgacctgtttgagccggatggagatgtcaacaga
ataatcttatcagagttggaaaggaaaataaaaacgctggaagaaagccatggcaatgta
aaaacgtcggttttgaaacttacaataaaaacacagagtttgttaaaggaaaagataaat
ttaaagagtatagaagagcacttaaaagaaaattgttttattctggctccggttgaagtg
cagattttggataccagaaaggattttaggattgccgatgtggatgaaaagtcagatcct
gttttcgcatttgaaagatacttatccgcaagtcaaaagtataaagatataaagaacaaa
aatgaggttgtgacagtttttaagactttgcttgatgaagtgaaggaaagttaa
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