Caldicellulosiruptor morganii: OTK00_001645
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Entry
OTK00_001645 CDS
T08774
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cmor
Caldicellulosiruptor morganii
Pathway
cmor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OTK00_001645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmor03400
]
OTK00_001645
Enzymes [BR:
cmor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OTK00_001645
DNA repair and recombination proteins [BR:
cmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OTK00_001645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
DUF4296
HHH_5
HHH_8
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WAM33170
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Position
complement(1647192..1648049)
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AA seq
285 aa
AA seq
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MNIKEYTDFIRISGAQIDFDATFFSGQCFRWRKMDDFYIGIVDEKIIFIKPQDEYTFDIY
NCSPDEFKKSLYWYFDLDKDYDQILDRLSKHDIILREAVEKYRGMRLLNQEPFECMISFI
ISQNNNIKRIQLLIERLCQTFGKKITYKGYVAWSFPAEDSLFNASIDDFKQLGLGYRAEY
IKDAVEKIKNGTVNLNELVDLDVQEARQVLKSIKGIGDKVADCILLYSLQKYNIFPIDRW
VRRVLKEFYRLETKEQIKNFIESFGDLAGYAQLFLFHYIRNNYKN
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgaatataaaagaatatacagattttattcgaataagcggagctcaaattgattttgac
gccacctttttcagtggtcagtgttttaggtggagaaaaatggatgatttttacatagga
attgtggatgaaaagattatatttataaagccacaggatgagtatacatttgatatttac
aattgttcacctgatgaatttaaaaaatctctttactggtattttgatttagacaaggac
tatgaccagattttagataggctgtccaaacacgacatcattttaagagaagcagttgaa
aagtacagaggtatgaggcttttaaaccaggagccatttgaatgtatgatttcctttatt
atttctcagaataacaacataaaaagaattcagcttctaatagagagactttgccagact
tttggtaaaaagataacctacaaagggtatgttgcctggtcatttccagcagaagatagt
ctttttaatgcatcaattgatgactttaaacagcttggactgggctatagagcagagtat
ataaaagatgctgttgaaaaaataaaaaacgggactgtcaatttaaatgagttggttgat
ctggatgtccaggaggcaaggcaagttttgaagagtataaaagggattggagataaagtt
gcagattgtattttattatattcactgcaaaaatacaatatattcccgatagacaggtgg
gtgaggcgggtactaaaggagttttaccgacttgaaacaaaagaacaaataaaaaacttt
atagaatcatttggagatttagcaggttatgcccagctttttctgtttcactatataagg
aataactacaaaaattga
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