Caldicellulosiruptor morganii: OTK00_001997
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Entry
OTK00_001997 CDS
T08774
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cmor
Caldicellulosiruptor morganii
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmor03016
]
OTK00_001997 (truD)
Enzymes [BR:
cmor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OTK00_001997 (truD)
Transfer RNA biogenesis [BR:
cmor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OTK00_001997 (truD)
Prokaryotic type
OTK00_001997 (truD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruD
OMP_b-brl_2
Motif
Other DBs
NCBI-ProteinID:
WAM33492
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Position
complement(1988302..1989477)
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AA seq
391 aa
AA seq
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MKIKVLPEDFIVREKIDIEIKPSGRYKIYLLKKKHWNTIDALRFISKENKIPFEKIGCAG
RKDRHALTFQYISVPREYDINFNRENVKVEFVGYSDDFVSPLLLKGNYFEMVIRKIKSRD
ERIFNRIGEIEKFGFPNYFDDQRFGSVEREEEFIGEKIAKKHYNGALKLYFTVIHPEDKK
EEKERKKAIFELWGEFEKILPLCKTKVEKEIIKTLMKGKSRHYLIEAVNLIPKEEMSMFF
SAYQSYIWNKTLSLILPYYADLLKPVKGKIMDYLIYTTLSDRALSELKGLQIPTVSSRIP
FVNSLVNNTILEILNERGLKPSDFELKKIKKSFYKSFLRPAIVFPENLEFSDFEEDDFYS
GYFKLKLKFHLPAGSFATMFFKSLTLYITNI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
ttgaagattaaggttttgccggaggattttatagtcagagaaaaaattgacattgagata
aagccaagcggaaggtacaaaatttatcttttgaaaaagaaacactggaatacaattgac
gctttaaggtttatatcaaaggaaaacaaaataccatttgagaaaataggctgtgcagga
agaaaagacagacatgctcttacttttcagtatatttcggtaccaagggaatatgacata
aattttaatagagagaatgtaaaagttgaatttgttggatattcagatgactttgtttcc
cctctgcttctgaaaggcaattattttgaaatggtaataaggaaaataaagagcagggat
gagagaattttcaacagaattggcgaaatagagaagtttggctttccaaattattttgat
gaccagcggtttgggagtgttgagagggaagaagaatttattggtgaaaagatagcaaaa
aagcactacaatggggctctgaaactctatttcacagtaattcaccccgaagataagaaa
gaagagaaggaaagaaaaaaagctatatttgaactctggggagagtttgaaaaaatactt
cctctttgcaaaacaaaggttgagaaagaaataataaagactttaatgaagggcaagagc
aggcattatttaatcgaggctgtaaatcttattccaaaagaagagatgtcgatgtttttc
tcagcctaccagagctatatctggaacaaaaccctgagtctgattttaccgtattatgcg
gatttgctaaaacctgttaagggaaagattatggactatcttatctacacaaccctttca
gacagggctttgagtgaattaaaaggacttcagattccgactgtatcttcaaggatacct
tttgtaaatagtcttgtaaacaacaccatcctggagatattgaatgaaagaggtctcaag
ccctctgactttgaactgaaaaagataaaaaaatctttttataagtcctttttaagaccc
gcaatagtctttccggaaaaccttgagttttcagactttgaagaggatgacttttacagt
ggatattttaaactaaaattgaaattccatcttcctgccggttcatttgcaacaatgttt
tttaaaagcctgacattatacataacaaacatataa
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