KEGG   Cucurbita moschata (crookneck pumpkin): 111429966
Entry
111429966         CDS       T05248                                 
Name
(RefSeq) transcription factor PRE3-like
  KO
K28364  atypical basic helix-loop-helix transcription factor protein
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmos03000]
    111429966
Transcription factors [BR:cmos03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    111429966
SSDB
Motif
Pfam: bHLH_ILI HLH bHLH_IRO3 bHLH_NPAS4 SYCE1 CENP-F_leu_zip Syntaxin_2 PUMA_CC CLZ EzrA COG1_C DUF948 ANC1_spectrin SBP_bac_4HB MJ1674_2nd SYN8_N Spc24 DUF745 DUF7615 IcmF-related_N CSN5_C
Other DBs
NCBI-GeneID: 111429966
NCBI-ProteinID: XP_022921825
UniProt: A0A6J1E6W2
LinkDB
Position
Unknown
AA seq 91 aa
MSSRRSRSRQSGGSRITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNLH
REVDDLSERLSELLASSDTAQAAIIRNLLMQ
NT seq 276 nt   +upstreamnt  +downstreamnt
atgtcaagcagaagatccagatctaggcaatcaggcggttcaaggatcaccgatgaccaa
attaacgatctcgtttccaagttgcagcaacttcttcccgagattcgccactcgcaatcc
gataaggtttcggcagcaaaaatattgcaagagacgtgtaactacataaagaacttacac
cgagaagtggacgatctaagcgagagactatcggagttgttggcgtcgtcggatactgct
caagctgccatcattagaaacttactgatgcaatag

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