Cucurbita moschata (crookneck pumpkin): 111429985 Help Entry 111429985         CDS       T05248                                  Name (RefSeq) dicer-like protein 4 isoform X1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism cmos  Cucurbita moschata (crookneck pumpkin) Brite KEGG Orthology (KO) [BR:cmos00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:cmos03036]     111429985 Chromosome and associated proteins [BR:cmos03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     111429985    microRNA pathway     RISC loading complex      111429985 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 DEAD Helicase_C ResIII DND1_DSRM dsrm PAZ Cas3-like_C_2 IstB_IS21 Motif Other DBs NCBI-GeneID:  111429985 NCBI-ProteinID:  XP_022921844 UniProt:  A0A6J1E1P4 LinkDB All DBs Position Unknown AA seq 1654 aa AA seqDB search MPDGEINSTTADSVNFQPTSSASVERFMGLSPVDDQGAGSSIRTSGKDPRRIARKYQLEL CEKALEENIIVYLGTGCGKTHIAILLIYEMGHLIRRPQKGICVFLAPTVALVQQQAKVIE DSIDFKVKVYCGGSKCLNSHYDWEREMEEYEVFVMTPEILLRNLHHCYIRMEFVELLIFD ECHHAQVKSDHSYAEIMRVFYKANEHKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKL LDAKVYSVEDREELEAFVSSPRFKIYYYGPVATGSSSSFMTYCCPLEDVKCQCIVALGQM KGEHEGLLATKKLLCRMHKNIIFCLENLGVWGALQASKILLSEDNSERSELIEAAAANPK HDSISDRYLNQAAEIFASGCKIDAGVSDMLNVDILKEPCFSKKLLRLIGILSSFRHRPNM KCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGEL NLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELG LIDEFHKDEKRMNREISSRSSVETFDGHEESIYRVISTGASVTSGRSISLLHEYCSKLPH DTYFDPKPKFFYCDDLGGTICHAILPSNAPIPQIVSRPQPSGVAAKKDACLKAVEELHKL GALSDYLLPMRDNANEGELELDSDSDSSEDETSRRELHEMISPAAFKESWTGFGYVILYC YHIKFTPNPEDRIYKEFGLFVKAPLPQEAVRMDLELHLAHGRSVKVNLMPSRVVELMENE ITQAECFQEMFLKVILDRSEFVHDYIPLRNNVSRSISSTSYLLLPVIVHDIEGSVFIDWK VIRRCLSSQIFQNHACSIVKETASSDTHLILYDGRRRSSDIENSLVYVPYKREFFFVTNI VRRKNGYSQYKDSGSLSHFEHLKTRFGIQLKYPEQPLLCAKPLFSLHNLLHDRKQKDSEA PYLEEYFIDIAPELCQLKITGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAGFPAG AEVTANRILEALTTEKCQERISLERLEILGDSFLKFAVARYLFLAHDKFDEGELTRRRSY LVKNINLFKLATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRNDIHSHDNATNNAK ASETKCSKGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIKVEFEASQVTNAL VASKAYVLLADTINISALQSSLGYKFLHKGLLLQALVHPTYHKHGGGCYQRLEFLGDAVL DYLIMSYLYSAYPKLKPGLLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSASLQSDIKSY VDFIKSLPSERDSLEQPRCPKPLGDLVESSVGAVLVDTGFDMNYVWKIMLSFLDPIMSSS GFQLSPIRDIIEVCQNCGWKLQFNPSKMEKYYSVEAEVKGDDFHATASAVNRRKKDAEKI AANSILTKLKAQGFIPEVNSLEKILKSSEKMKPKLIGYDETPSVTMDQIDDGLEFSGADL DPRVHHEVGNSHPFRITRMSETLASSSGAAGEQLKPSIPLEGHDSSTDLLSSSSSSSSSS SSSGRSGKTTARSRLHEVCAINHWNHPSFNCMNEEGPSHLKMFTYKVVLEIEEAPDTIFE FFGAPHLTKKAAAEHAAEAALWYLKKERYLGDTD NT seq 4965 nt NT seq  +upstreamnt  +downstreamnt atgcctgatggagagatcaattctacgactgccgatagcgtcaattttcagcccactagc tctgcgtcggtcgagagatttatgggtctgtctccggtggatgatcagggagcgggttca agtataagaacatcaggcaaagatccaaggagaatcgcaaggaaatatcaattggagcta tgcgagaaagctttggaagagaatatcattgtttatcttgggacaggctgtgggaagact cacattgctatacttctgatatacgagatgggccacttaatcaggaggccccagaagggt atctgtgtttttctggctcctaccgttgctttagttcagcagcaagcaaaagttatagaa gattctatagatttcaaggtcaaggtctactgtggaggttccaaatgcttgaatagccat tatgattgggaaagagagatggaagaatatgaggtttttgtcatgacccctgaaatatta ctgcgtaatttacaccactgctatatcaggatggagtttgttgaacttctaatatttgat gaatgccatcatgcccaagtcaaaagtgaccattcttatgcagaaatcatgagagtgttt tataaagcaaatgagcataaacgaccccggatatttggcatgactgcatctccagttgta ggaaaaggtgcttgcaatcagcaaaatttatccaagagcatcaatagtcttgagaagtta cttgatgcaaaggtttattcagttgaagatagggaagaactggaagcgtttgtgtcatca ccacgttttaaaatctattattatggtcctgttgcaactgggtcgtctagctcatttatg acttactgttgcccacttgaggacgtgaaatgccagtgtatagtggctcttggtcagatg aaaggtgaacacgaaggactgctggccaccaagaaactgttgtgcaggatgcacaaaaat atcatattttgtttggaaaaccttggtgtttggggggcattgcaggccagtaaaattctc ttaagtgaagataactctgagcgaagtgaattgatagaggcagcagcggcaaacccaaaa catgactccataagtgatagatatcttaatcaagctgctgaaattttcgcatcgggttgc aagatagatgctggggtgtcagatatgttaaatgttgatattttgaaagagccatgtttc tcaaagaagcttttacggcttattggaattctttcttccttcaggcatcgacccaacatg aagtgtataatttttgtgaatagaatagttatagctaggtccttgtcgtacatacttcag aacctcaaatttctggcatattggaagtgtgattttctcgtcggagtccactcaaagttg aggagcatgtcaaggaagaccatgaaccatattcttacaaaattccgatcaggagagcta aaccttttgattgcaacgaaggttggtgaagaagggcttgatattcagacctgctgtctt gtgatacgatttgatcttcctgaaacagtatctagctttatacaatcaagaggtcgagca cgaatgcctcagtctgaatatgccttccttgttgatagtggaaatgaaaaggagctaggg ttgatagatgagtttcataaagatgaaaaacggatgaacagagaaatttcttctcgctca tccgttgagacatttgatggtcatgaagaaagcatctatagagtgatttcaactggtgcg tctgtcacttctggaagaagtatatctttactacatgaatattgctcaaaacttccacat gacacgtacttcgaccccaagccgaagtttttctattgtgatgatttaggaggaactata tgtcatgcaattctgccctccaatgcaccgatcccccaaattgtcagcagaccacagcct tctggggttgctgctaaaaaggatgcttgtctaaaagctgtagaggaattgcataaactt ggtgctctcagtgactatctcttgcccatgagagacaatgccaatgaaggggaattagaa cttgactctgattctgacagctccgaagatgagacttcgcgacgggagcttcatgagatg atatctcctgctgctttcaaagagtcttggactggctttggatatgttattctttactgt taccatattaaatttactccaaatcctgaagataggatctacaaagaatttgggttattt gtgaaggcaccacttccccaggaggctgtgagaatggaccttgagcttcatcttgcacat ggaagatctgtaaaggtaaatttgatgccatcaagggtcgtcgagcttatggagaatgag attacccaggctgagtgttttcaggagatgtttcttaaggtcattttagacagatcagaa tttgttcacgactacattccattgaggaataatgtctctagatctatttcatcgacatct tacttgttgcttcctgtgattgtccacgatattgagggatcggttttcatagattggaaa gttattagaagatgtttatcctcccaaattttccagaatcatgcatgctctatcgtcaaa gaaactgcttcctcggatacccatttgatcctttatgatggccgtagaaggtcgagtgat atcgagaatagtttagtgtacgtcccctacaagcgtgaattcttttttgttactaacatt gtgaggaggaagaatggatacagccaatacaaggactcagggtccttgagtcattttgag catttaaagaccaggtttggcattcaacttaaataccctgagcagcctcttctttgtgca aaacccctattcagtttgcacaacttgctacatgatagaaagcagaaagattctgaagca ccttatctggaagaatattttatcgatatcgctcccgagctttgtcaattgaagataact ggattttcgaaagacatcgggagctctatatctttgttgccatcaattatgcatcgtcta gaaaatttgcttgttgctattgaattgaagtgtatgctagcggctggttttccagcagga gctgaggttactgctaacagaattctagaagctctcaccactgagaagtgccaggaacga atttccctggaaaggcttgaaatacttggtgactctttccttaaatttgccgtagcaagg tacctttttctcgcccacgataagttcgatgaaggagaacttacacgacgacgttcttat ttggtgaaaaatatcaatttgttcaagctagcaactagaaagaatttacaggtatacata cgtgaccagccatttgaacctagccaattttatttacttggtcgtccttgcccaagaatt tgtaacgaggaaacacgaaacgatatccattctcacgataatgcaacaaataatgcaaaa gctagtgagaccaagtgcagcaaaggccatcactggttacagaagaaaacgatcagcgat gtggtcgaagctctggtaggagcattcctagtcgacagtggcttcaaagctgcaattgca tttctcaaatggatcggcataaaagtagaattcgaagcttcgcaggttaccaatgctctc gtggcaagcaaggcttacgtcctacttgcagatactataaacatttctgcacttcaaagc tcattaggctataaatttctccataaaggtctgttgctgcaggcgctcgtacatccgact taccacaagcacggaggaggttgttaccagagattagagtttcttggggacgccgtcctg gattacttgatcatgtcgtatctatattcagcatatcctaagctgaagccgggtctattg acggatttgagatcagtgtttgtgaggaacgaagcttttgccaacgttgcggtcgatcga ttcttctacaagtttctgctttgtgattctgctagccttcaaagtgatataaaaagttat gtagacttcatcaaatcacttccttcggaaagagattcgctcgagcagccgagatgtcca aagcctttgggagacttggtggagtctagtgttggggccgttcttgttgatacagggttt gatatgaactatgtctggaagataatgttatcatttctggatcctatcatgagctcttca ggcttccagcttagtcctattcgcgacataatcgaagtttgtcaaaattgtggctggaaa cttcagtttaatccatcgaaaatggaaaaatattactcggttgaagcagaggtgaaaggg gacgactttcatgccacggcttctgctgtcaaccgtcgaaagaaagacgccgagaaaatc gctgccaactctatactcacgaagttgaaggctcaaggattcatacctgaggtgaattca ttagagaagattttaaagtcgagcgagaagatgaaacctaaattgattggttatgatgaa acgccctcggtcacgatggatcaaatcgacgatggcttagaattttctggtgcagactta gatcctcgtgtgcaccatgaagttgggaattctcatccatttcgtattacacggatgagt gaaacgctggcttcttcatctggagctgcaggagaacagctgaagcctagcatccccctt gaaggtcatgatagttcaacagacttgctgtcgtcgtcgtcgtcgtcatcgtcatcatcg tcatcgtcaggtcggtcggggaaaacaacggcaagatctcgtctgcatgaagtttgtgcc ataaaccattggaatcacccttcatttaactgcatgaatgaggaaggaccaagccattta aagatgttcacatacaaggttgtgttggagatagaagaagcccccgatacgattttcgag ttcttcggagcaccacatttgacgaagaaggcggcagcggagcatgcagcagaagcagct ctttggtacttgaagaaggaaaggtacttgggtgacacagattga

DBGET integrated database retrieval system