Cucurbita moschata (crookneck pumpkin): 111430487
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Entry
111430487 CDS
T05248
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04120
Ubiquitin mediated proteolysis
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111430487
04120 Ubiquitin mediated proteolysis
111430487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111430487
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111430487
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111430487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_16
zf-RING_5
FlxA
Motif
Other DBs
NCBI-GeneID:
111430487
NCBI-ProteinID:
XP_022922503
UniProt:
A0A6J1E3K4
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA
QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM
ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGLSTAAGHHGPQSDANQQGTGTT
SSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVER
PLPDSNNIEPNGHPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGSSQNVSG
LHLEAQQRFLQQQIEILQNQLQHLRKPEVEESSGAGEADKKGKSVAFSSPSPSPSSSDSR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcaaacatatgcggggattagtttcattgcaaccatagtggttatctat
catgccttcaacagtagaggccagttctacccagcactggtctatttatcgacttccaag
ataaatctagtgcttcttctcaatatgggtctagtcatcatgtgcattttgtggcagcta
acaaagaaaatatttctcggttctcttagagaagcagaggttgagaggctcaacgagcaa
tcatggaaggagttgatggaaatcctctttgccataactattttccgccaagatttttct
gtttcattccttggtatggttacggctctgttgttgatcaaagctttgcattggttggct
cagaagagggttgaatacatggaaaccactccatcggtgccgttgttgtctcatatccgg
atagtttccttcttaggcttcctctttgttctagatagtctgtttttttataattcgata
gaatctctgatacagacaaggaaggcctcggtttccctcttcttttcatttgagtatatg
attcttgcaacaacggctgtgtcaacgtttgtaaaatatattttctatgtcagtgatgta
ctcatggagggacaatgggaaaggaagcccgtctatacattttacttggaacttatccga
gacttacttcacttgtcaatgtacctgtgtttctttcttgtgattttcatgacctatggt
gtgcctttgcacttgatccgagagctctatgagatctttaggaattttaggattcgtatt
gcagattacatccgttatagaaagattacttcaaacatgaatgatcgctttcctgatgca
acgcctgaagaactcaattcaagtgacgcaacatgcattatctgtcgtgaagagatgaca
gttgcaaagaaactagtatgtggacatctttttcatgtccattgcctccgatcctggttg
gagcgacaacatacttgcccaacctgcagagcccttgttgtaccacctgaaggtttaagc
acagcagccggtcatcatggaccacaatctgatgctaaccaacaaggaacaggaaccaca
agttcatccgcgcaaggtacgagtgatacaggtgttgctaatgataatttgagccatcat
caggctagagtccgagctgctgcggctgcagcttctgtatatgagaaatcatatgtttat
ccttgtgcgagcacattagtatggtctcctggatatgcagtagttcctcaggttgaaaga
cctttgcctgactccaataacatagaaccaaatggacatccacaacaattttcttttacc
ggcggcccttccaacctgttcttcactcaatttccccagaatctttttgttccttttcag
ccacgagagggtactggaaacagtacggacggattgggcagtagtcaaaatgtatcaggc
ttacatcttgaagctcaacaaagatttctccagcaacagattgagatcctacagaatcag
ctgcaacatctccgtaaaccagaagttgaggaaagctcaggagcaggtgaggcagataag
aaagggaaaagtgtagcattctcgtcaccgtcgccatcgccgtcgtcatctgattctcga
tga
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