Cucurbita moschata (crookneck pumpkin): 111430533
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Entry
111430533 CDS
T05248
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111430533
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111430533
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Squash
Pect-lyase_RHGA_epim
DUF4347
Motif
Other DBs
NCBI-GeneID:
111430533
NCBI-ProteinID:
XP_022922566
UniProt:
A0A6J1E4H0
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGSMKIVAVALIAILLVATLSSAAYAIDDDSMDLVFDGRDINHRVPRKIMKWGVLNHEER
VCPKILMECKKDSDCLAECLASAACTNAIKLVSDGENEMESGFGSKMMKNEFPSPIDSVI
LSLWNVSASSDFNVLDYGAVGNGKTDDSQAFLKVWKDVCGATIGIPTLRVPIGKTYLLKP
LKFEGPCNPKRVNFEVRGTIMAPSVAAWPSHNEENWIQFLDIAGLNINGAGQFDGQSSSW
WKDCHSNCTPPTLRLRETKHINSVKNHISINACNDAIISDVHIIAPENIPNTYGFNVSRS
NNVVIQNSLIETGDECISLYNGSFNINIVGVTCGPGYGISIRSLGEDGGYNVIENINVSN
CTLKGTQNGLRIKTSQVNISSF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcatgaagattgtcgcggtggctctaatcgcaattttgctggtagcaacgttg
tcgtcggctgcctatgccatcgacgacgactcgatggaccttgtcttcgacggtcgagac
atcaatcatagagtcccaagaaagatcatgaaatggggagtgcttaatcatgaagaaagg
gtatgtcccaaaatcctcatggaatgcaaaaaggactctgattgcttagctgagtgttta
gcctcggcggcctgcacgaacgcgatcaaactcgtgagcgacggtgaaaatgagatggaa
agtgggtttggaagcaagatgatgaaaaatgagtttccaagcccaatcgatagtgtcatt
ttaagcttgtggaatgtatcagcttcatctgattttaatgttcttgattatggagcggtt
ggaaatggaaaaacggatgattcacaagcttttttgaaagtatggaaagacgtgtgtggg
gcaacgataggcatcccaacattgcgtgtaccaattggaaaaacttacctattgaagcct
ctcaaattcgagggcccttgtaaccctaaacgagtaaattttgaggttagaggaactatc
atggctccgagcgtggctgcatggcctagccataacgaagaaaactggatccaattcttg
gacatagctggtctcaatatcaatggggcaggtcaattcgatggccagagttcttcttgg
tggaaagattgtcattcaaactgcacacctccaacgctccgactacgagaaactaagcac
atcaatagtgtcaaaaatcatatctccataaacgcttgcaatgatgccattatctcagac
gttcacatcattgctcccgaaaacatccctaacacatacggattcaacgtttctagatca
aacaatgttgttattcaaaactccttaatcgaaacaggtgacgaatgtatttctctatac
aatggatcttttaatatcaatatcgtcggtgttacttgtggacctggttacggtataagc
attagaagcttaggagaagatggaggatataacgtaattgaaaacatcaatgtaagcaat
tgcaccttaaagggcactcaaaatggattgagaatcaagacttcacaggttaatataagt
agtttttaa
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