KEGG   Cucurbita moschata (crookneck pumpkin): 111430581
Entry
111430581         CDS       T05248                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111430581
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111430581
   03041 Spliceosome [BR:cmos03041]
    111430581
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111430581
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111430581
Spliceosome [BR:cmos03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111430581
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 111430581
NCBI-ProteinID: XP_022922628
UniProt: A0A6J1E3Y4
LinkDB
Position
Unknown
AA seq 436 aa
MDVTKKRRMDENGVDSSDHSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHVDVLDAVR
CIADRDVSQRKLFIRGLSCDTSTEGLRSLFSAYGELEEAVVIIDKVTGKSKGYGFVTFKH
VDGSILALKEPSKTIDGRVTVTQLAAVGVSGQSSNAADLSLRKIYVANVPMDMPADKLLA
HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIDGRQLSCKYANDG
KKGKPGGGTDGIQTTGAGQGNLHGDGMPMAPPSAIPGSGGQYGGPGGMGSYGGFSGGPQG
AQPLGHHPLNSSMGPGISSVGSQALSSQGSSGGYGGGPYGGGYGGPGSSIYGGMGSVGGG
LGSSGGGLGGAGGVSSLYRLSQSSVGMPSGGYPDSGHYSSMSSASGHPNHHHQQAGASPS
PRVPPGGLYPNMPPYY
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggacgtcaccaagaagcggaggatggacgaaaatggcgtcgactcctccgaccattct
ttctctagaattactcctgaagacgctcgcaagatcattgatcgtttcactccggaccag
cttatcgatattttacaagatgcagtttcgcgtcacgtggatgttcttgatgcagtacgg
tgtattgcagaccgtgatgtctcccagcggaagctgtttattcggggtcttagttgcgat
actagtacagaaggtttgcgttctctcttttccgcttatggcgagcttgaagaagctgtt
gttattattgacaaggtgactgggaaatcgaaaggttatggctttgtgacttttaagcat
gttgatggttctatactggctttgaaagaaccgagcaagacaattgatggccgcgttacg
gtgacgcaattggctgcagtgggagtttctgggcagagttcgaacgctgcagacttgtcg
ttgaggaaaatttatgtggcgaatgttccaatggatatgccggccgataaactgttggca
cacttttcgctgtatggagaaattgaggagggaccgctaggcttcgataagcagacgggt
aagtgtagaggctatgctttgtttgtgtacaaaaaggcagagggtgctcaagcagctctg
gttgatccaatcaagacgattgatggaaggcagttgagttgtaaatacgctaacgatggg
aaaaaagggaaacctggcggtgggacggatggaattcaaacgacgggagcgggtcaagga
aacttgcatggagatggtatgcctatggctcctccatcagcaatccccggttcgggcgga
caatatggtggtcccggtggcatgggatcgtatggaggcttttctggtggccctcaaggg
gcgcagccacttggtcaccatccgctcaactcttcaatggggccaggaatatcctctgtc
ggtagtcaggctctatcttcgcagggcagctccggcggatatggtggcggtccatatggt
ggtgggtacggcgggcccggttcctcaatatatggcggtatgggaagtgtaggtgggggc
ttgggtagttctggaggtggattgggcggagctgggggtgtttcatcactatataggtta
tcacagagttcggttggaatgccttctggtggttatccggatagtgggcattatagtagc
atgtcatcagcatccgggcacccaaatcaccaccatcaacaggcaggagcatcaccatca
ccacgtgttccacctggaggattgtatcccaatatgccaccatattactga

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