Cucurbita moschata (crookneck pumpkin): 111431058
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Entry
111431058 CDS
T05248
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030
DNA replication
cmos03420
Nucleotide excision repair
cmos03430
Mismatch repair
cmos03440
Homologous recombination
cmos03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111431058
03420 Nucleotide excision repair
111431058
03430 Mismatch repair
111431058
03440 Homologous recombination
111431058
03460 Fanconi anemia pathway
111431058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmos03000
]
111431058
03032 DNA replication proteins [BR:
cmos03032
]
111431058
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111431058
Transcription factors [BR:
cmos03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111431058
DNA replication proteins [BR:
cmos03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111431058
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111431058
MMR (mismatch excision repair)
111431058
DSBR (double strand breaks repair)
HR (homologous recombination)
111431058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
DUF223
zf-CCHC_3
CDC24_OB3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
111431058
NCBI-ProteinID:
XP_022923334
UniProt:
A0A6J1E641
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH
YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV
PATRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSW
TRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAK
NEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRAT
CFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSI
PHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV
ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEA
RTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSF
VKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL
TWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE
QRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPGLENIGGGQFVSPIRNS
TNNVGREYGTPNRGVQYGDHHNSSWPTPSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAP
SVGGGMYLNRVSGSSGRDSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggtagcatcaatggcgccttttaagctgacggaaggagccgtgatggtgatatgcaag
agagaatcgtcggcagagacgttccagccggttgtacaagtaattgacttaaaattggtt
aacactacgcaacaatcgggcagcgagaggtatagattgttgctttctgatggaactcat
taccagcaaggaatgctgggcactcagctcaatggattggttaagtccgggaagttacag
aaaggttccatcgttcaattgcggcagtatgtttgtaatcccgttcaagaacgcctaatt
ataatcgtcattgagttggatgtgataaaggaaatgtgtgactttattggcgagcctgtt
ccagcaacaagatcagtatcagccgcatttagtggaaacccccaatcctctatgggggct
tcatccggcagcggaatacttggtaatgtgaatgtatctggtgcgtcttttgaacagcct
aaagtgaatcaatcacaagtaccgcatgtgggatctcattttaacactcctaattcttgg
acaaggtttaacggttcatctcctgtaactgggtcgtatggtgatcagaagatggcatac
cacaacaatggatcagatattcccaggccacctctaaatgcttatgcttatgcccctcct
cagccaatacatcagcagccaccttcgatgtacagtaacaggggaggaccggtagcaaaa
aatgaagctcccccaaggataatgcctattactgctctgaacccttaccaaggaaggtgg
acaataaaggctcgagttacttcgaaaggagaacttagacactacaataatcctcgtgga
gatgggaaagtgttttcatttgatctacttgatgcatgcggtggagaaatacgagcaaca
tgcttcaatacagtagctgatcagttttacaaccagattgaatctggtaaagtatacttc
atttctaaaggaagcttgaaacctgcacaaaagaactataaccatctcaataatgacttt
gaaatatttcttgaaaacacatcaacaatccaagcttgctttgaggatgaccaatcaatc
ccccatcagcagtttcatttccatcacattagtgagattgagggcatgggtagcaacagt
gttgtagatgtaattggtgttgtttcttccattaatcctgcaacgtctctcatgagaaaa
aatggtaccgagactcagaagagatcccttcagttgaaagatatgtctggccgaagcgtc
gaattgactctttggggaaacttttgtcaagcagaagggcaaaaattgcaaaacatgtgt
gactcagggttgttcccagttttggctgtgaaatctggtagagtgagcgacttcaatggg
aaggcggtgggaaccatttcaacaagtcagcttttcgtagagccagatttccccgaggct
cgtacattaagagggtggttcgaaaaggaaggaaggagtactccttctgtctccatatcc
agggaagttgctaccatgggcaggacagatgtccgtaagaccatatcccaaataaaagat
gagaggttaggaacctctgagaagccagattggatcactgttagtgcaactgtttcattc
gttaaggttgataatttctgttacacagcatgtcctatcatgatcggggatcgtcaatgc
agcaaaaaggttacaaataacggagatggaaaatggagatgcgaccggtgtgatcagtct
gtcgacgaatgtgactacaggtacatattgcagctgcaaatacaggatcatactggctta
acttgggtgactgcatttcaagaaggcggtgaggagatcatgggcttacctgcaaaaaga
ttgtattatttgaagtacgaagaacaagatgatgaaaaatttgcagaaatcatccgtaag
gttctttttacaaaatttattatgaagttgaaagtaaaggaagagacttttagtgatgaa
cagagagtgaaatcaactgtcatgaaggcagaaagcattaacttttcgaccgagtccagg
tttcttctagatttgatggaaaagctcagggcagggaacaccatacaaaatcctggagtt
tttcgccccggattggagaatataggtggtggacagttcgtgtcgcccattcgaaatagt
accaataatgttggcagagaatatggtacaccgaaccgaggtgttcagtatggggaccat
cacaacagttcttggcctactccatccacactgcataactcgcgcacgtactgcaacagc
tgtgggggatcgggtcacagctcaatgaactgtccgagtatcatcagcagccctgcacca
tctgttggaggagggatgtacttaaatcgagtttcaggctcgtctggtcgtgactctggt
gaatgcttcaaatgccatcaaaccgggcactgggctagggattgccctggtttggccact
ttccctccagcttatggtaacagtggcttcacggctaggtga
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integrated database retrieval system
