KEGG   Cucurbita moschata (crookneck pumpkin): 111431295
Entry
111431295         CDS       T05248                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020  RNA polymerase
cmos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111431295
  09124 Replication and repair
   03420 Nucleotide excision repair
    111431295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmos03021]
    111431295
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111431295
Transcription machinery [BR:cmos03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111431295
  RNA polymerase III system
   RNA polymerase III
     111431295
  RNA polymerase I system
   RNA polymerase I
     111431295
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111431295
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_Ribbon_YjdM DUF5816 Zn_ribbon_13 HypA DmmA-like_C Cas12f1-like_TNB Prok-RING_1
Other DBs
NCBI-GeneID: 111431295
NCBI-ProteinID: XP_022923649
UniProt: A0A6J1GTY0
LinkDB
Position
Unknown
AA seq 51 aa
MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggatcctcaacctgaaccagtcagttacatctgtggagattgtggaatggagaacact
ctgaagcaaggtgatgtcatacaatgccgagagtgtggttatcgtattctctacaagaag
cgcacccgtcgcattgttcagtatgaggcccgctga

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