Cucurbita moschata (crookneck pumpkin): 111431420
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Entry
111431420 CDS
T05248
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111431420
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111431420
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
111431420
NCBI-ProteinID:
XP_022923821
UniProt:
A0A6J1E7R9
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK
MTNNIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISS
YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG
DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD
KNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA
SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW
VRSLTSSSGALRCSSKSRC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccacccaactctttgttctgtctcttatttccctcactctcctctccgcagtt
tcttattcagaaggcaatgggttgaagatgaacgccattgacagatgctggagatcgaac
ccttactggaggagaaacaggcaacaactgggcgtttgctcggtgggtttcgttggaaaa
atgaccaacaacatcggaagaaatctcatacgctaccaagtcaccgaccctagcgacgac
cctataaacccacgcccaggtacactccgatacggcgccacaatgatcaaatccaaagtc
tggatcaccttccaaaaagacatgcacatcctgctccacaagccgcttctcataagcagc
tacacagccatcgacgggcgaggggccagcgtccacatctccgggaatgcatgcctggtg
gtctccaaggccaccaacatcataatccacggccttatcatccaccactgcaaggctcag
ggcgcaggccaagtcatgggccctaattccaagttggtttcgcttggacacgtggacggc
gatgccattcgtttagtatcagcatccaaagtctggattgaccacaacacactgtaccgc
tgcgaggatgggctgctcgacgtcaccagaggctccactgacatcaccatttccaacaat
tggttccgcgaccaagacaaggttattcttctcggccacgaggacggctatgtccgagac
aagaacatgagagtcactgtcgtctataaccattttggacccaactgcaaccaaaggatg
ccgaggatccgacatgggtatgcgcacgtggcgaacaatttgtaccaaggatggacgcaa
tacgcaattggagggagcatgaatccaagcgtcaagagtgaagccaacctgttcatcgca
tcaaaatcaaaacagattgtatggagcaccgggaaagtagaggcggcaaaatggaagttt
cattccgtcagagacgtttttgaaaacggagcttccttcggacagattggtgtggggcga
ggaggcgtaaagccaaattacagcgcccagcagcggtttccagtggctgatgctaagtgg
gtgagatcattgacgagctcctccggggctctacgctgctcgtcaaagtcaagatgttga
DBGET
integrated database retrieval system