Cucurbita moschata (crookneck pumpkin): 111431534
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Entry
111431534 CDS
T05248
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111431534
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111431534
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111431534
NCBI-ProteinID:
XP_022923975
UniProt:
A0A6J1EDH2
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAPPTVVLSLLSLFFLSVSLSAALSASPAAVPNPEIVVEEVHRSIINATKRRNLGYLSCG
TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGRIYVVTDAGDDDPVNPKPGTL
RYAVIQDEPLWITFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWNWRSVGD
LMVNGAFFTASGAESSSSYARASSLGARPSSLVGTITTNAGALSCRKGSRC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgccaacagtcgttctctctctcctctccctctttttcctctccgtctctctc
tccgccgctctctccgcctcccctgccgccgtacctaacccggaaatcgttgtagaagaa
gtacacagatccataatcaatgcgacgaagaggagaaatttggggtatctctcatgtggg
accggaaatcccatcgacgattgctggcggtgcgacccgaattgggagaaaaatcgacag
agactagctgactgtggaatcggctttggaaaaaacgccatcggcggtcgtgacggccga
atctacgtcgtcaccgacgccggcgacgatgaccctgtcaaccccaaaccaggaactctc
cgttacgccgtcatccaagacgaacccctctggatcaccttcgctcgcgacatggtcatt
cgattaaaagaggaactaatcatgaactccttcaaaaccatcgacggccgtggtgcgagc
gtccacatcgccggcggcccctgcattacgattcaatacgtaacaaacatcataatccac
ggtctcaacattcacgactgtaaaccagggggaaacaccgacgttcgagattcccctcgg
catttcggattcagaaccatatcggacggcgacggcgtttcaatcttcggtggtagccat
gtttgggtcgatcattgctctttatcaaactgtaacgatggtttaatcgacgcgattcat
gggtccacagccatcacgatttcaaacaattacatgacgcatcacgataaagtgatgcta
ttaggccacagcgattcgtacacacaagacaagaatatgcaagtcaccatagctttcaac
cacttcggcgaagggcttgttcaaagaatgcccagatgccgacatgggtacttccatgta
gtgaacaatgactacacgcattgggaaatgtacgccatcggaggtagcgccgcgccgacc
atcaacagtcaggggaacagattcgttgcaccaaatgacagattcagcaaagaagtgacg
aaatacgaggatgcaccggagagtgaatggaagaattggaactggcggtcggttggggat
ctgatggtaaacggtgcgtttttcacagcctccggcgccgaatcgtcgtccagctacgcc
agagcgtcgagcttaggggcgcggccgtcgtctcttgtcggaacaatcacgacgaatgcg
ggtgcactgagctgcagaaagggctcccgctgctga
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