Cucurbita moschata (crookneck pumpkin): 111431604
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Entry
111431604 CDS
T05248
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111431604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111431604
03012 Translation factors [BR:
cmos03012
]
111431604
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111431604
Translation factors [BR:
cmos03012
]
Eukaryotic type
Release factors
111431604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
WD40_alt
Motif
Other DBs
NCBI-GeneID:
111431604
NCBI-ProteinID:
XP_022924056
UniProt:
A0A6J1E8H1
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MDIEEDIRALELDSPDVNGVPNPDARMEEIVKSDNVEEDLKTEDHPQPAQAIHVEEQCDV
KEKIPAKEKEISLTENEGEGDLELDRKRHLNVVFIGHVDAGKSTIGGQILFLSNQVDERT
IQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETDTTRFTILDAPGHKSY
VPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVAKLLVVVNKMDEP
TVKWSKERYDEIESKMAPFLKSSGYNVKKDVQFLPISGLHGVNMKTRVDKKVCPWWDGPC
LFEILDTIEGPPRNPKDPFRMPIIDKFKDMGTTVMGKVESGTVREGDSLLVMPNKIQVKV
AAVLCDESKVKSAGPGENLRVRISGIEEEEIMSGFVLSSVAKPIPAVSEFVAQLQILELL
DNAIFTAGYKAVLHIHAVVEECEIIELLQQIDPKTRKPMKKKVLFVKNGAIILCRIQVNN
LICIEKFSDVPQLGRFTLRTEGKTVAVGKVTDIPAASN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggaggacattcgtgctttagaacttgattcaccagatgttaacggggtt
cccaatccagacgcaagaatggaagaaattgtgaaatccgataatgtggaagaagatttg
aagacagaggaccatccccaaccagcccaagctatccacgttgaagaacaatgtgatgtg
aaggagaaaatacctgctaaggagaaggaaatctctttgactgaaaatgaaggtgaaggg
gatttggagttggatcgtaaaagacacttgaatgttgtgttcattggtcatgttgatgct
ggtaagtctacaattggaggccagatacttttcctcagcaatcaggttgatgagcgtaca
atccaaaagtatgaaaaagaagcgaaggataaaagcagagaaagctggtacatggcgtat
atcatggacacaaatgaagaggagagagttaaggggaaaactgttgaagtgggaagagca
cattttgaaactgatactacaaggtttacaatattagacgctccgggtcacaaaagttat
gtcccaaatatgatcagtggggcatctcaggctgatataggggttctggtaatttctgct
aggaaaggagaatttgaaactggatatgagagaggtggacagactcgtgagcatgttttg
ctggcaaaaacgttgggtgttgctaagcttcttgttgtagtgaataagatggatgaaccc
acagtaaaatggtcgaaagaaaggtatgatgagatagagtctaagatggcacccttcttg
aagtcatctggttacaatgtaaagaaagatgtccagtttttaccgatatctggtcttcat
ggtgttaatatgaaaaccagagtggataagaaagtatgtccctggtgggatggtccgtgc
ttgtttgaaatccttgatacaattgaaggtccaccaagaaatccaaaagatccatttagg
atgcctatcattgacaaattcaaggacatgggaacaactgttatgggcaaagtcgaatct
ggcaccgtgcgcgagggtgattccttattggtaatgccaaataagattcaggtgaaagtt
gctgctgttttgtgtgatgaaagcaaagttaagagcgcaggacctggtgaaaatcttcgt
gttagaatatctggaattgaagaagaagaaataatgtctgggtttgtactatcaagtgtt
gcaaaacctatacccgctgtttctgagtttgttgcgcagttgcagattcttgagctgctg
gataatgcaatatttacagctggatataaggccgtacttcacattcatgctgttgttgaa
gaatgtgagatcatagagctgcttcagcagattgatccgaagactaggaaacctatgaaa
aagaaagttctctttgtgaagaatggtgcaattattttgtgccgcatccaggtcaataac
ttgatctgcattgagaagttttctgacgttcctcagcttggaagatttacacttcgtact
gaagggaagacagttgctgtaggaaaggtcactgatattccggctgcaagcaattaa
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