Cucurbita moschata (crookneck pumpkin): 111431840
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Entry
111431840 CDS
T05248
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111431840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111431840
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111431840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Clathrin
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40
TPR_VPS8_2
WD40_CDC20-Fz
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
zf_RING_Vps8
zf-RING_2
MinC_N
Beta-prop_TEP1_2nd
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
111431840
NCBI-ProteinID:
XP_022924308
UniProt:
A0A6J1EC21
LinkDB
All DBs
Position
Unknown
AA seq
1961 aa
AA seq
DB search
MTKELTDTETLPPMELDLNAFIHAHLSSGDDDDDDDEDDLSFPHRSIDEILNESSSSTSS
SPSSPPNSPPPRDHRSIAARDGRASASRSIPPFKSPFEEIIKASKVPRSNQRNEKSVQLK
PGSVSHTKVGELTDDPFRRGSRALPSLFGGVRSNAKPGAALAAAAAASRSMPAPHAAAIK
SRRSGHGSVVLDDDELASSSAVDSEFVFDDLYPTIDHSKESREKSISLVERNADYQGASV
NVGGEFWARDNIRDCVLYNDEFRITKDTECEAEQSFVDDVNFDESSTTLPPVEANGRSLS
DSADNNVCSMDAEPTVLDVDESNEGAFPSSPKPDYDRSAVGYGRLELETQDFEKRFQPSK
DSEVLAIEDLSVVNDISESRETAEQLDNFHTGERAETMSLSSSNPLELAEEIEKKQAFTA
LHWEEGVAAQPMRLEGIKGGTTALGYFDIQADNSISRTISSHSFKREHGFPQALAVHANY
IAVGMSKGNIVVVASKYSAQNGDNMDAKMLLLGSQGDKSTAPVTSLCFNQQGDLLLAGYS
DGQVTVWDVLRATAAKVISGEHTSPVVHSLFLGQEAQVTRQFKAVTGDSKGLVLLHTFSV
VPLLNRFSIKTQCLLDGQKTGTVLSASALLLNEFCGSSLPPSLSNVAVSTSSIGSMMGGV
VGGDSGWKLFNEGSSLVEGVVIFATHQTALVVRLSPTVEVYARLSKPDGIQEGSMPYTAW
KCSQSIETSPSEAVERISLLAIAWDKMVQVAKLVKTELKVCGKWSLESAAIGVAWLDDQV
LVILTVTGQLFLFEKDGTMIHQTSVFVDGFDKEDFIAHHTHFVNVLGNPEKAYHNCVAVR
GASVYVLGPKHLVISRLLPWKERVQVLRKAGDWMTALSMAITIYDGHAHGVIDLPRSLES
LQELVMPFLIELLLSYVDEVFSYISLAFCNQIEKNEKLDDVTSGSHSAHSEIKEQYNRVG
GVAVEFCVHITRTDILFDEIFSKFVAVQQRDTFLELLEPYILKDMLGSLPPEIMQALVEH
YSQKGWLQRVEQCVLHMDISSLDFNQVVRLCRDHGLYSALVYLFNKGLDDFRTPLEELLA
VLQTSKSKRASAIGYKTLVYLKYCFSGLAFPPGQGTLAHSRVQSLRDELLQFLLENSDTV
DTRSISNKSSEVGYLNLYHLLELDTGATLDVLRCAFVEGEIVKADSSLDGSVDASMQVQK
EKNFLVQNVVDALIHILDKAISQTYGSPGGDNITLVEDWPSKKDLFHLFDFVANYVACGK
ATVSKDVVGQILEHLISNSDIPEMEIDFVHSVTANSVHSRKREKQVLSLLEVIPETHWNP
SSVLRMCEKAQFFQVCGLIHSISHQYSSALDGYMKDVEEPIHAFAFINRTLMELSYSEQT
EFRGVVISRIPELLNLNREGTFFLVIDHFGNDVSDILSQLHNHPRSLFLYLKTLIEVHQS
GNLNFSCLKKDDNFGVNYSTKGLDDYLQKLSDFPKFLSNNPVDVTDDIIELYVELLCQYE
RESVLKFLETFDSYHVEHCLRLCQQYEVIDAAAFLLERVGDVGSALFLTLSSLDKKFHDL
EAAVGGIVTNGASSGSNDSQLFSSVLKLQEVNDIYVLLHACIGLCQRNTPRLNSEESETL
WFKLLDSFCEPLIESFNYRTASFGENQVQFLNESSGSQKDKEAHIVTWRILKSNQTAHIL
RSLFSRFIREIVEGMIGYVHLPTIMSRLLSDNGSQEFGDFKLTILGMLGTFGFERRILDT
AKALIEDDTFYTMSLLKKGASHGYAPRGAVCCICNRLLVKSSSSYRVRVFNCGHATHLQC
EVLDNEASGGDFSCPVCVHSNHSQRSRGKALTEYSLVNKFSSRTQSSSGAFVSYPQETDL
LELPYTLQQIPRFEILANLQKNQRVIDIENMPQLRLAPPAVYHDKVTKGYHLLVGDSSGG
IEKVEKLNKSRQLKEVKVKRPSSLRFPLKANLFGKEKTTKS
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggagctgactgacaccgaaacactgcctccaatggagctggacttgaatgcc
ttcatccacgcacacctctccagcggcgacgacgacgacgacgacgacgaagacgaccta
tcattccctcaccgtagcatcgacgagattctaaacgaatccagttcttccacctcatct
tcaccatcgtctcctcccaattcaccgccgcctcgtgaccatcgctccatcgccgcaagg
gacggcagggcctctgcttctcgttctataccaccattcaagtcaccgtttgaggaaata
ataaaggcttctaaagttcccagaagcaaccaacggaatgagaagtcagttcaattgaaa
ccaggttcggtctctcatactaaggttggtgaattaacggacgatccgtttcgaagggga
tctcgtgcattgccatcgttgtttggaggggttagatcgaatgccaaacctggggcggcg
cttgccgcagctgctgcggcttctcggtccatgccggctccgcacgctgcagcaatcaaa
tcgaggaggtcaggacatgggagcgtggttcttgacgatgacgaattggcttcctcttct
gctgttgattcagagtttgtctttgatgatttatatcctactatcgatcattcaaaggag
tctcgcgaaaagtcaatttcattggtcgaaaggaatgccgattatcagggtgcatctgta
aacgtcggtggtgaattttgggcaagagacaacattcgagactgtgtcctatataacgat
gagtttcgtataactaaagatacggaatgcgaagcggaacagagttttgtggatgatgtg
aatttcgacgagagctctacaactctgccgccagtggaagctaacggtagaagcttgtct
gattctgctgacaacaatgtttgttcaatggatgcagaaccaacagtattggatgtcgat
gaatcaaatgaaggggcctttccgagttctcccaaacctgattacgacagaagtgccgtg
ggctatgggaggctggagttggaaactcaagatttcgagaaacgttttcaaccatcaaaa
gattcggaggttctagccattgaggatctcagtgtagtgaacgatatcagtgaatcgagg
gaaacagccgagcagctggataactttcacaccggtgaacgtgcagaaacgatgtccctg
tcctcgtctaatccactcgaattggccgaagaaattgaaaagaagcaagctttcactgca
ctgcattgggaagaaggcgtagctgctcaaccaatgagacttgaaggtattaagggaggc
acaacagcattggggtacttcgacattcaagctgacaatagtatttcaagaacaatttca
tcacattcgttcaagcgtgaacatggttttccccaagccttggctgttcatgcaaattat
attgcagttggaatgtcaaaaggaaatattgttgtggtggccagtaaatactcagctcaa
aatggcgacaacatggatgcgaagatgctgctgcttggatcacaaggtgataaatcaact
gcgccagtaacatctctatgctttaatcagcaaggggaccttcttctggctggttacagt
gatggtcaggttacagtctgggatgtgttgagggcgacagcagccaaggttatttccgga
gaacacacatcaccagttgttcattcattgttccttgggcaggaggctcaggttactcga
caatttaaagcagtcactggcgatagtaagggtctggttttgttacatacgttctcagtg
gttcctttgctaaatagattctccattaaaactcagtgtcttcttgatgggcaaaaaacg
gggactgttctatcagcttcagcacttcttttgaatgaattctgtggaagttctttgcca
ccatctctttcaaatgtcgcagtttcaaccagcagtattgggagcatgatgggaggggtt
gttggaggagattcaggctggaaactcttcaatgaaggatcatctttggttgaaggagtt
gtcatatttgctacccatcaaactgctctggtggtaaggctgagtcccactgtggaagtg
tatgctcggctctctaagccagatggaattcaggaaggttctatgccttacactgcatgg
aaatgctcacagtctattgaaacttcaccttctgaagcagtagaaaggatttcgttgctt
gcaattgcctgggataaaatggttcaggtagcaaagttggtgaaaacagagcttaaagta
tgtggcaagtggtcccttgagagtgcagccataggtgtggcatggttagatgaccaggtt
cttgtcattctcacagtaacaggacaactcttcttatttgagaaggatggaaccatgatt
caccagacaagtgtatttgtagatgggtttgataaggaggatttcattgcacatcacacc
cactttgttaatgttttgggcaatcctgagaaagcgtatcacaattgtgtagctgttaga
ggagcttcagtatatgtgttgggaccaaagcatctcgttatttcccgtctccttccatgg
aaggagcgggttcaggttctaaggaaagcaggggactggatgactgcccttagcatggca
ataaccatttatgatggccatgctcatggtgttattgatctccctaggtcgttggagtcc
ttgcaagagttggtaatgccctttctgatcgagttgctgttatcatacgtggatgaagtg
ttttcatatatttcattggctttttgtaaccaaattgaaaagaatgaaaaattggatgat
gtaacgagtggaagccattctgcacattctgaaataaaagagcaatataatcgtgttggt
ggagttgcagttgagttttgtgtccacatcacgaggactgatattctctttgatgaaatt
ttctccaaatttgtggctgttcaacagagagatacatttttggagcttctagaaccatat
attttaaaggacatgcttggatcattgcctccggagattatgcaagctttggtagagcat
tatagccaaaaaggatggttgcagcgtgtagaacagtgtgttcttcacatggatatttct
tccttagattttaatcaggttgttaggttatgccgggatcatggattgtatagtgcattg
gtgtatcttttcaacaaaggattagatgatttcaggacacctttagaggagctgttggca
gtgttacaaaccagtaaaagcaaacgtgcttctgccattgggtacaagacactagtttat
ctgaaatattgcttttcaggacttgcttttccaccaggccaaggaactcttgctcattca
cgcgtgcaatctcttagagatgaactactacagtttttgttggagaattctgataccgtg
gatacaagatcaatttcaaataaatcatctgaagttggatatttaaatctgtatcatctc
ttagagttagatactggtgctactttagatgttttgagatgtgcttttgttgaaggtgaa
atcgtcaaagctgattcttctctagatggttcagtggatgcaagtatgcaggtacaaaaa
gaaaagaactttctagttcaaaatgtagtcgatgctcttattcatattcttgataaggct
atcagtcaaacatacgggtccccaggtggcgataatatcacattggttgaagattggcct
tcgaagaaggacttatttcatttgttcgattttgttgccaattacgttgcgtgtggaaag
gctactgtctctaaggacgtagttggtcagattttggaacacttgatatccaatagtgat
attccagaaatggaaattgattttgtgcatagcgttactgcaaacagtgtacattcaaga
aaaagggaaaagcaagtactttctctcttggaggtgataccagagacccattggaatccg
tcttctgtgttaagaatgtgtgagaaagcacaatttttccaggtttgtggcctaattcat
agcatcagtcatcagtattcatcagctttggatggctacatgaaagatgtagaggaaccc
attcatgcttttgcctttatcaacagaacattaatggagctcagctattctgaacaaact
gaatttcggggagtggtcatttctcgaattccagagcttcttaatttaaacagagaggga
acattcttcttggtcattgatcatttcggcaatgatgtttcagacatcctttcccagctt
cataatcatccaagaagcctatttctgtacttaaaaactctcattgaggttcaccaatct
ggaaacctgaacttttcttgcttaaagaaagatgataattttggggtcaactattcaact
aaaggattggatgattacctgcaaaagctctctgatttccctaaatttctgtctaacaat
cctgttgatgtgactgatgatataattgagctttatgtggagctactttgtcagtatgaa
cgtgaatcagttctcaagtttttggagacttttgatagctatcatgtggagcattgtttg
cgcctctgccaacagtatgaggttattgatgctgcagcattcttgttggagagggttggt
gatgttggtagtgctcttttcttaacactttctagcctagacaaaaaattccatgaccta
gaggctgctgtgggaggcattgttacaaatggtgcttcaagcggttctaatgattcacaa
cttttcagctctgttttaaaattgcaagaggtgaatgatatatatgttttgttgcatgct
tgtattggactgtgccagcgaaatactcctcgtttgaactctgaggagtctgagacactt
tggttcaaattactcgactcgttttgtgagcctttaattgaatcatttaattatagaact
gcttcttttggagaaaatcaagttcaattcttgaacgagtcatcaggttcacaaaaggat
aaagaagcacatatagttacatggagaattttgaagtccaatcaaactgctcatatatta
aggagtttgttctctcgatttatcagagagatagttgaggggatgataggatatgttcat
cttccaactatcatgtccagacttctctctgacaacggaagtcaagaatttggcgatttt
aagcttaccatacttgggatgcttgggacttttggctttgaaagaagaattctggatact
gccaaagctttaattgaggatgacacgttctataccatgagtttattgaagaaaggggca
tctcacggatatgctccccggggtgctgtctgttgcatatgtaatcgccttcttgtcaag
agctcatcaagttacagagttcgagtttttaactgtggtcatgcaactcatcttcagtgc
gaagttcttgataatgaggcttcaggtggagacttctcatgcccagtttgtgtgcatagc
aatcactctcaacggtctagaggcaaagcactgactgagtacagtctagtgaataaattt
tcatcaagaactcaatcgtcgtcaggagcctttgtttcatatccacaagaaacagattta
ttggagcttccatacactcttcagcaaataccacggtttgagattctggctaacttacag
aaaaatcagagagtaatagacatagaaaatatgcctcaattgaggcttgcaccaccagcc
gtctaccatgacaaggtcacaaaaggatatcatcttttagtaggagatagcagcggtgga
atagaaaaggtagaaaaactaaacaagagcaggcaactgaaggaggtaaaagtaaagaga
ccgtcctcccttcgattccctttaaaagcaaatctattcgggaaagagaagacgaccaaa
tcttga
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integrated database retrieval system
