Cucurbita moschata (crookneck pumpkin): 111432011
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Entry
111432011 CDS
T05248
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111432011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111432011
Spliceosome [BR:
cmos03041
]
Common components
Common spliceosomal components
SR proteins
111432011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Cornifin
Gp5_trimer_C
Nup35_RRM_2
RNA_bind
SET_assoc
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111432011
NCBI-ProteinID:
XP_022924566
UniProt:
A0A6J1ECU9
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEEERDAEDSIRSLDNMPF
GYDRRRLSVEWARGERGRSRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
LNVRIRRNFAFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDHYDDSPRRA
AYGRLGDSPYRRSPSPVYHRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPDYGRN
RSPEVGRNRSPEVGRNRSPDYGRNRSPDYGRNRSPDYGSNRSPDYGRNRSPEVGRNRSPE
VGRNRSPEVGRNRSPEYGSVRSRSPIRRSRT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgatatttgttgggaacttcgggtatgacacccggcaatctgaactggagcgg
ttattcgccaaatatgggagagttgaaaggatcgacatgaagtctggttttgcattcgtt
tactttgaagaagagagggatgctgaagattctattcgtagccttgacaacatgccattt
ggttatgatagacgcagattgtctgtggaatgggctaggggtgaacgaggtcgcagtcgt
gatggatccaagtcgatggcaaatcagaggccaaccaaaaccttgtttgtgatcaatttc
gacccgattcgtactagagttcgtgatattgaaagacacttcgaaccttatggaaaggtg
ctcaatgttcgcattagaaggaactttgcatttgtacaatttgagacgcaggaggaggca
accaaggcccttgagtgtacccacatgagcaaaatattagatagggttgtatcagtggag
tatgctttgagggatgacggtgagaggggtgaccattatgacgatagccctcgaagagca
gcttatgggcggcttggggatagtccttatcggaggtcacctagtcctgtgtatcaccgt
cgaccaagtcctgactacggacgagctcgcagccctgcttatgacaggtataatggccct
tatgaacgacgtaggagccctgattatggcaggaatcggagccctgattatggcaggaat
cggagccctgaagttggcaggaatcggagccctgaagttggcaggaatcggagccctgat
tatggcaggaatcggagccctgattatggcaggaatcggagccctgattatggcagcaat
cggagccctgactatggcaggaatcggagccctgaagttggcaggaatcggagccctgaa
gttggcaggaatcggagccctgaagttggcaggaatcggagccctgaatatggtagtgtt
cgcagtcgttcacccattcggaggtcaagaacctaa
DBGET
integrated database retrieval system
