Cucurbita moschata (crookneck pumpkin): 111432029 Help Entry 111432029         CDS       T05248                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos03440   Homologous recombination cmos03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:cmos00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     111432029    03450 Non-homologous end-joining     111432029  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cmos03032]     111432029    03400 DNA repair and recombination proteins [BR:cmos03400]     111432029 DNA replication proteins [BR:cmos03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     111432029 DNA repair and recombination proteins [BR:cmos03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      111432029     BRCA1-C complex      111432029    NHEJ (non-homologous end-joining)     MRX complex      111432029 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 SMC_N AAA_15 AAA_21 Rad50_zn_hook SbcC_Walker_B AAA_29 ABC_tran AAA_16 AAA_13 AAA_22 Motif Other DBs NCBI-GeneID:  111432029 NCBI-ProteinID:  XP_022924587 UniProt:  A0A6J1E9E7 LinkDB All DBs Position Unknown AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKS QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEHIWEISKLQTEAEV HMSLKNERDSNIEELFARHNLGSVPNTSFSDEVASNLTNRIKSRLVDLDKDMQDKRVSND VELKTAWDCYMGANDRWKNIEAQKHAKADIKRGIVRRIEAKESERDSFELQISHVDLSHI DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRLPPEKDLKKEITQALRAVGMEYDDLNS KSREAEKDVNMLQMKIQEVNNNLSRYQKEMESRKRFVESKLQSLDPHSFSVDLYLKALEG AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS SAEHMKVLAMESSSADSHFQHLDKLRMVFEEYVKLSNETIPKAEKELHQLNEELDEKSQA LDDVVGVLAQVKADRDAIENLVQPIDTADRLYQEIQTWQKQVDDLVYKLDFRGKGVKTME EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVRK AEEELDRLTEERGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNHEYEELGDKKRK FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILVELNKSKD LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAELGKLSQDRE RLLSELNRFHGTMSVYQSNISKNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY NALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDDLQHSIIESQEIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagtacagtggacaagatgctgataaaaggtattcggagtttcgacccggaaaatagg aacgtcatcaccttcttcaagcccttgactctgatcgttggccctaacggtgccgggaaa actaccataattgaatgtttgaagctctcttgtaccggcgagttgcctcccaatgccagg tctggccacagcttcattcacgacccgaaggttgcaggagagacagagacaaagggacaa atcaagcttcggtttaagacagcggcaggtaaggatgtggtctgcataaggtcattccaa cttactcagaaggcatcgaaaatggagtataaagcaattgaaagcgtgcttcagacgata aacccacatactggcgagaaagtttgtctcagctatagatgtgcagacatggatagggag attcctgctttaatgggtgtgtcaaaggctatcctggaaaatgtgatatttgttcaccaa gatgaagctaactggccattgcaagatccttcaacattaaagaagaaatttgatgatatt ttctctgctacaagatatacaaaggcattggaggtcataaagaagcttcacaaggatcag gctcatgaaataaagacttacaaactaaagttggagaatcttcaaactttaaaagatgca gcatataagctcagggaaagcatttctcaagatcaggaaaaaacagaatctgttaaaagc caaatgcaggaactggagaagaacatccaagatgttgatgccaaaattcatcatgctgaa acacttctgaaagatgtgcgaaaactacaggaccaaatatctactaagactgccgaaaga agcactttatttaaggagcagcagaagcaatatgctgctctcgctgaggagaatgaagac actgatgaagaattgaaggaatggaaaaccaagtttgaagaaagaattgctattttggag tctaaagtaagcaagttggagagggagatgaatgacatggagacaaagagttcctttctt aagcagacaattaatgaacatatatgggagataagcaagcttcaaacagaagctgaggtg cacatgtcattgaagaatgaacgtgattctaatattgaagaactttttgcaaggcataat cttggttctgtgccaaatacttcctttagtgacgaagttgcatccaacctaaccaataga ataaaatcaagactggtggaccttgacaaggatatgcaagataaaagggtttcaaatgat gttgaacttaagacagcgtgggactgctacatgggtgcaaatgatcgatggaaaaatatc gaggcccaaaaacatgctaaagctgacattaaaagaggaattgtgagaaggattgaagcg aaggagagcgagcgagattcatttgaacttcaaatttctcatgttgatctttctcacatt gatgaaagagaaaaaaatatgcaaattgaggtcgagagaaagacaaaccagcttgctgaa agagaatttgaatcaacaatacgtcaaaagcaaagtgatctatatggtattgagcagaaa atcaaggctgttaacagagaaaaggacataatggctggtgactctgaggacagagtaaaa cttgctctcaagaaagcggagttagataatcataaaaagaagcatagaaagataatcgat gagtacaaggacaaaattagaggagtgctgaaggggagattgcctccagagaaggatttg aaaaaagaaatcactcaagcactcagggctgttggtatggagtatgatgacctaaattct aaatctcgtgaagccgagaaggatgtgaatatgttgcagatgaaaatacaggaagttaat aacaacctttccagatatcaaaaggaaatggagtcaagaaagagatttgttgaatccaaa ctccagtccttggatccacactcttttagtgttgatttgtatctcaaggccttggaaggg gctaaggagaaaaaagatgtgcaaaaaagcaagtacaatattgccgatggtatgcgtcaa atgtttgatccatttgaaagagttgcccgtgctcatcatgtttgcccttgttgtgagcgc cccttcacagcagaagaagaagatgaatttgttaaaaagcaaagagtgaaggctgcaagt tctgctgagcatatgaaagtgcttgccatggagtcttccagtgccgactcccatttccag catctggacaagctccgcatggtttttgaagaatatgtcaaacttagcaatgaaacaatt cctaaagcagagaaagaacttcatcagcttaacgaagagctggatgaaaagtcacaggcc cttgacgatgtggtgggcgtcttagctcaagtaaaggctgaccgggacgcaatcgagaac ttggtgcaacctattgacactgccgacagactttaccaagaaattcaaacttggcaaaag caagttgatgacttggtctacaagcttgattttcgagggaaaggtgtgaaaacaatggaa gaaattcagtcagagctgaatgcattgcaaaacaccaaagatggtttacacaatgaacta gagaagctaagggatgaacaaagatatatggaaaatgatttgtccaacattcagataagg tggcacactcttagagaggaaaaagtgaaagctgctaatactttgcgtgacgttaggaag gcagaagaagagttggaccgtctgaccgaggaaagaggtcaagtcgatcttgatgagaag catttggcagaagctcttatccctttgtcaaaggagaaagacaaactacttaacgactat aatgaactaaaagataaacttaatcatgaatacgaggagctgggtgacaaaaagaggaaa tttcagcaggaagtcgagacgcttcttaggacaacttcaaagattaaagagtaccttgat ttaaagaaaggtgagaggctaaaagaactgcaggaaaagaaagcacaggctgaatctcag cttcaaggttgtgacagtaggaagcaggaaatattggttgaattaaacaaaagtaaggac ttgatgcggaatcaagatcaattaagaaggaacattgaggacaacttgaactacaggaaa acaaaggctgaagtcgatgagcttgctcgtgatatcgaatcattggaagagcaaatttta aagatcggaggggtttcaactgttgaggccgaactaggaaaactgtctcaggacagagag aggctattgtctgagctaaacaggtttcatgggacaatgtctgtctatcaaagcaatatt tcaaagaataaaattgatttgaagcatgcgcaatacaaggacattgacaagcggtatttt gatcagctaattcagcttaagacaactgagatggcaaacaaggacttggacagatattac aatgcccttgacaaagcactcatgcgcttccacagcatgaaaatggaggaaataaataaa attataagggagttgtggcaacaaacgtataggggacaagatattgactatataagtatt cactcagattctgagggtgcaggaactcgttcatatagctacaaggttctcatgcagaca ggagatgcagaactagaaatgagaggaaggtgcagtgctggtcagaaggttcttgcctct cttataattcgattagcattggctgaaacgttctgcctcaactgcggaatactcgctcta gacgagccaaccaccaatcttgatggtccaaatgccgaaagtcttgctgcagctcttcta cgaatcatggaggacaggaaagggcaggagaactttcagctcatagtaattacacacgac gagcgtttcgctcagctaattggtcagagacagcatgcagagaagtattatcgtgtaacg aaagacgaccttcagcatagcataatagaaagccaggagatatttgattga

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