Cucurbita moschata (crookneck pumpkin): 111432214
Help
Entry
111432214 CDS
T05248
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111432214
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111432214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111432214
NCBI-ProteinID:
XP_022924851
UniProt:
A0A6J1EAL4
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAMAESGGWIRLFLLVVFMLFVGAIARVPKEIPEIHNEATGKLQSSSNSSMAVRLEEPEA
ETPGNKHAVDNPDEIAAMVDMSIRNATARRELGFFSCGTGNPIDDCWRCDPNWQQNRKRL
ADCGIGFGRNAIGGRDGRFYVITDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIQL
KQELIMNSFKTIDARGSNVHIANGACITIQFVTNVIVHGLNIHDCKPTGNAMVRSSPNHV
GWRTIADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITITNNYFTHHNEVMLLG
HSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTIN
SQGNRYAAPTNPFAKEVTKRVETAESEWKNWNWRSEGDLLMNGAFFTPSGAGASASYARA
SSLGAKSSSMVATITATAGALSCRRGHPC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcggaatctggagggtggattcgtttgtttcttctcgtggtgttcatgttg
ttcgtcggagcaattgccagagttcccaaagagattcctgaaattcataatgaggcaacc
gggaagttgcagagctcaagcaactcatcaatggcagtgaggttggaggagcctgaggct
gagactcctggcaataagcatgccgtggacaacccagacgagatcgctgctatggttgac
atgagtatccgcaatgccactgcgaggagagagcttggtttcttctcgtgtggaaccggc
aatcctattgatgactgctggcgctgcgaccccaattggcaacagaaccgcaaacgtcta
gcagattgtggcattggctttggccgaaatgccattggtggtcgtgatggtcgattctac
gtcatcactgactctggcgacgatgatcctgtcaacccaaggcctggcactttgcgacat
gccgttatacaggatgaacctctctggatcgtgttcaaaagagacatggtgatacagctg
aaacaggagctgatcatgaacagtttcaagacaattgatgcacgtgggtccaacgtgcat
attgctaatggagcttgcatcacaatccagtttgtgaccaatgttattgtccatggtcta
aacatccatgactgcaagcccactggaaacgccatggtaaggagttcacccaatcacgtt
gggtggagaacaattgctgatggggatgccatttccatttttgggtcaagtcatatttgg
attgatcacaattccctctctaactgtgctgatggcctcgttgatgctgtcatgggatcc
accgcaattaccatcaccaacaattacttcacccaccacaatgaggtgatgttattgggg
catagtgattcttacgttagagataaacaaatgcaagtgaccattgcttacaatcacttt
ggagaaggactcatccaaagaatgccaaggtgtagacacggatacttccatgtagtgaac
aatgattatactcactgggaaatgtacgccattggtggaagtgcaaatccaaccatcaac
agccagggtaacagatatgctgctccaaccaacccttttgcaaaagaggtgaccaagaga
gttgagacagctgaatctgagtggaaaaactggaattggagatcagaaggagacctattg
atgaatggtgcctttttcactccatctggtgcaggggcctcagcaagctatgctagagcc
tcaagcttgggagcaaaatcttcatccatggttgctaccataacagccaccgccggtgca
ctttcctgccggagaggccatccctgctag
DBGET
integrated database retrieval system