Cucurbita moschata (crookneck pumpkin): 111432315
Help
Entry
111432315 CDS
T05248
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111432315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111432315
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
111432315
Prokaryotic type
Archaeal type
TFB
111432315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
111432315
NCBI-ProteinID:
XP_022924909
UniProt:
A0A6J1EAJ6
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcgttctgctccgactgcaagcgtcagacggaggttgtcttcgatcactct
gccggagacaccgtgtgctctgagtgcggccttgtgctcgagtcgcactccatcgatgag
acgtccgagtggaggacttttgccaatgagtctggggataacgacccggttcgtgttggt
ggaccgtccaacccgcttttggctgatggtggcctttccacggtgattgccaagcctaat
ggtacggcaggggagttcttgtcctcgtcattaggtcggtggcagaatcgggggtctaat
ccagatcgagggttgattcttgcattcaagacaattgctactatgtctgataggttgggc
cttgttgcaaccattaaggatcgggcgaatgagatatataaaagagttgaagatcaaaag
tctagtagaggaagaaatcaagatgctttattggctgcttgcttatacattgcttgtcga
caagaagacaaaccccgcacagtcaaggaaatttgctctgttgctaatggggcaacaaag
aaggagattggccgagcaaaagaatacatcgtgaaacagttggggctggagacgggtcag
tctgtggagatgggaacgatacatgctggagactttatgaggcgtttttgttctaatctt
ggcatgaataatcaagctgttaaagctgcccaagaagctgtacagaaatctgaagagttc
gatattaggagaagcccaatatccattgctgcagcagttatttacattattactcagctt
tcagacgataagaagcctctaaaagacatatcggtagctaccggtgttgcggaagggacg
attagaaactcatataaagatctgtacccgcatgtttcgaagataataccggggtggtat
gctaaagaggaggatcttaagaacctgtgcagtccttga
DBGET
integrated database retrieval system
