Cucurbita moschata (crookneck pumpkin): 111432477
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Entry
111432477 CDS
T05248
Name
(RefSeq) DNA helicase INO80-like isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111432477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111432477
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
111432477
INO80 complex (yeast)
111432477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
111432477
NCBI-ProteinID:
XP_022925142
UniProt:
A0A6J1EAZ7
LinkDB
All DBs
Position
Unknown
AA seq
1544 aa
AA seq
DB search
MDRHRQSKDLFYSNLFNLEFWVLLQPLVNFQLPQPEDDFDYYANSSHDESRDSPGRTITT
QGNGTMTKRELSLVRKRRQSLNSEEEEDHGANDYYGTHVTEERYRQMLGEHIKNYKRRSK
HPSPMPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFASLLT
PNRVIYEPAYLDIGDGIIYKIPPTYAKLAASLNLPSFSDIQVEEVYLEGTLDLGSLTSMI
ADDKRFGNRSQAGMGDPRHQYESLQARLDALSASNSSQKFSLKVSDIGLNSSIPEGAAGS
IKRAILSEGGVLQIYYVKVLEKGDTYEIIERSLPKKQNVKKDPSVIEREEMEKIGKIWVN
IVRRDLPKHHRNFTAFHRKQLIDAKRFSEICQREVKMKVSRSLKMMRGAAIRTRKLARDM
LLFWKRIDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKS
NLHPSEALPLGDEKPDYQEGTWNSDSMPAEEEDPEEAELKKEALRVAQDAVSKQKRLTSA
FDDECSRLRQASEPDPNEVAGANNIDLLHPSTMPVTSTVQTPELFKGSLKEYQLKGLQWL
VNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEDKNIWGPFLVVAPASVLNNWVDEINRF
CPDLKALPYWGGVTDRAILRKKINPKNLYRRDAGFHILVTNYQLLVADEKYFRRVKWQYM
VLDEAQAIKSSTSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQF
NEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVVSELTKKTEITVHCKLSS
RQQAFYQAIKNKISLAGLFDSNRHINGKKALSLMNIVIQLRKVCNHPELFERNEGSTYLY
FADIPNPLLPPPFGELDDVHYSGGHNPIEFKLPKLVHQDVLQSSKSFAVAHGIGGYLQKH
FNIFSSENVYRSIFMQGDYLRQSYRQSGTFGFTHLMDLSPAEVMFLANGSFLERLLFSIT
RWDRQFLDEIVGFIMESIDDDDPENGSLEQGKVRAVTRLLLMPSISQTNLLRRKLATGPG
DAPFEALIIPQRERLQSNVGLLHAAYTFIPRIRAPPIGIHCSDRSFTYRTVEQLHDPWVK
RLFIGFARTSDFNGPGKPNEPHPLIQEIDSEIPVSQPALQLTYGIFGSSPPMQSFDPAKL
LTDSGKLQTLDILLKRLRAENHRILLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDR
RDMVREFQLRNDIFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQT
KDVTVYRLICKETVEEKILERASQKNTVQQLVMTGGHVQGDILAPEEVVSLLLDDAQLEQ
KLREIPIVAKGRYQNKQAKGIRVDAEGDASLEDLMNTESRGTEYDVPSPDPEKTNSSTKK
VLYFLCLLLLTNLKEKLERERPKRTTSASGGLELLLMVLELDTGRCASKEAKPRRRVDTR
WCASKDVGLRRGVDWESHINWRRERVPARALDPEAGWIVISHIG
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcacaggcaatccaaggacttgttctactccaacctcttcaaccttgagttt
tgggtcctgctgcagccattggtgaacttccaacttccgcaaccagaggatgattttgat
tattatgctaatagtagtcatgatgagagcagagatagcccaggtagaacaattacaaca
cagggtaatggtaccatgactaagagagagttgagcttggtgagaaaaagaaggcagtcc
ctgaacagtgaggaggaggaggatcatggtgcgaacgattactacgggacgcacgtcact
gaagagcggtatcggcaaatgcttggagaacacattaagaattataagcgaaggtctaaa
cacccatctcccatgcctgcacgtatgggtaattcagtgtccaaaggtaactcaagttta
agagctaggaggtcagggagtgaacaacatgaaggatttcttgaaatggaaacagcaaat
gattataatcctcatagaccaggaattcatcatgatccggattttgcttcgctgcttacc
cctaacagagtaatatatgagcctgcatatttggatattggggatggcatcatttacaaa
attcccccaacttacgctaagctggccgcttcactgaacttgccgagcttctctgacatc
caagtagaggaagtttacttagagggtactttggatttggggtctttaacatccatgatt
gctgatgacaaaagatttggaaaccgaagccaggcagggatgggggaccctcggcaccag
tatgaatcgcttcaggcaagattagatgccttgtcagcttcaaactcgtcacagaagttc
agtcttaaagtatctgatattgggctgaattcatccatccctgagggggctgctggaagt
ataaagcgagctattttatccgagggtggcgtgctacaaatatattacgtaaaggttttg
gagaagggagacacttacgagattattgaacgcagcttgcccaagaagcaaaatgtaaag
aaagacccttctgtcatagagagagaggaaatggagaagattggaaaaatctgggtcaac
attgtaaggagagacttgccaaaacatcaccgaaatttcacagcatttcatcgaaagcag
ctaattgatgccaagaggttctcagaaatttgccaaagggaggtgaaaatgaaggtcagc
agatcacttaaaatgatgaggggtgctgctattcggacaaggaaattagctagagacatg
ttgctcttttggaagcgtattgataaggagatggcagaagtgcggaaaagggaggaaaga
gaagctgctgaagctttgagacgggagcaggaacttcgagaagctaagagacagcagcag
aggctcaattttcttatacaacaaacagaactttatagtcattttatgcagaacaagtct
aatttgcatccttctgaagctctgcctttgggagatgaaaaaccagattaccaggaaggg
acttggaactcagatagcatgcctgctgaggaagaagatcctgaggaggctgaactgaag
aaggaggcacttagagttgctcaagatgcagtctcgaagcagaaaaggttaacaagtgca
tttgatgatgaatgctcaagactacgccaagcttctgaacctgatccaaatgaagttgcc
ggagctaataacatcgatctgcttcatccctcaaccatgcctgtaacttcaacagtacag
acacctgagttgtttaaaggtagccttaaagaatatcagctaaaaggtctccaatggttg
gtcaattgttatgagcagggtttaaatggtatacttgctgatgaaatgggccttggaaag
accatccaggcaatggtatttttggctcatttggctgaggataaaaatatatgggggccc
tttcttgttgttgcacctgcatcggtcttgaacaattgggtcgatgaaatcaatcgtttc
tgtcctgacctgaaagctcttccatattggggtggggttacagatcgtgcaattcttagg
aaaaagattaatcccaagaatttatatcgcagggatgctggttttcacatcctcgttacc
aactatcagctacttgttgctgacgaaaagtattttcggcgtgttaagtggcaatatatg
gtattggatgaggcacaggcaatcaaaagttcgacgagcataaggtggaaaacactgcta
agctttaattgtcggaaccgcttgctgcttactgggacacctgtccagaataatatggcc
gagttgtgggcccttttacattttatcatgcctactttatttgacagccacgaacagttc
aatgagtggttctcaaaaggaattgaaaatcatgcagaacatgggggtactttgaatgaa
caccaacttaaccgcttgcattcaatactaaaaccttttatgttgcggagagtaaaaaaa
gatgtagtctctgagcttactaaaaagactgagattacagtgcattgcaagttaagttct
cggcagcaagctttttatcaagctatcaagaataagatatctcttgctgggttgtttgac
agcaataggcatattaatgggaagaaagctctcagtcttatgaacattgtcattcagcta
agaaaggtatgcaatcacccagagttgttcgaaaggaacgagggaagcacgtacttatac
tttgcagacattccaaatcctcttttgccccctccttttggggaacttgacgacgtacac
tactcgggaggccacaatcccatagagttcaagttaccgaaactggtccaccaagacgtt
cttcaaagttcaaaatcatttgcagttgcacatggcattggaggatatcttcagaaacat
tttaacatattttcttcggaaaacgtttatcgatccatattcatgcaaggagactattta
cgtcagtcatatcgtcaaagtggtacttttggtttcacccatttgatggatctatcccct
gcagaagttatgtttttggccaatggttcttttctagaacggctacttttttccataacg
agatgggaccggcaatttctcgatgaaatcgtgggattcattatggaatctattgatgat
gatgatccagaaaatggttctctcgagcagggaaaagtgcgcgccgttacaagactgttg
ttgatgccttccatatctcagactaacttgctccggagaaaactcgcaacagggcctggt
gatgctccttttgaggctttaatcattcctcaacgggagaggcttcagtccaacgttggg
cttcttcacgcagcatacacgtttattccaaggattcgagctccaccgataggtattcac
tgctcagatagaagctttacttaccgaacggttgaacaattgcacgatccttgggttaag
agattgtttatcggctttgcacgaacatctgactttaacggaccagggaagccaaacgaa
ccccaccctttgattcaagagattgattctgaaataccagtttcccagcctgctcttcag
ttgacgtacggtattttcgggtcctctcctccaatgcaaagttttgatccagcaaagttg
ctcacggactctgggaagctacaaacactcgatatattactgaaacgcttgcgagccgaa
aatcatcgtatactcctgtttgctcaaatgacaaaaatgttgaatattctcgaggattac
atgaattatcgaaaatataaataccttagactcgatggatcctccactataatggatcgt
cgagatatggtcagggaattccaacttcggaatgatatttttgtgttcttattgagcaca
agagctggtggacttggcattaacttaacagctgctgatactgtcatcttctatgaaaat
gattggaatccgacattggatttgcaggcgatggacagagctcaccgtctcggacagaca
aaagacgtcaccgtttacagattgatatgcaaagagacagttgaagagaagattcttgaa
cgagctagccagaaaaacactgttcagcagcttgtcatgacgggcggccatgttcaagga
gacatcttagctcctgaggaggtcgtttctttacttctcgacgatgcgcagttggagcaa
aaattacgagaaatacctattgtggcgaagggtagatatcagaacaaacaagcgaagggt
ataagagttgatgctgagggagatgcatccttggaggatctaatgaacaccgaatcccgg
ggtactgaatacgacgttccatctcctgatcccgaaaaaactaactccagcacgaaaaag
gtattgtactttctatgtctattattactaacaaaccttaaggagaaacttgaaagagaa
agaccaaagaggacaacatctgctagcggtgggcttgagttgttactaatggtattagag
ctagatactgggcgatgtgcgagcaaggaggctaagccccgaaggagggtggacacgagg
tggtgtgccagcaaggacgttgggctccgaaggggggtggattgggagtcccacatcaat
tggagaagggaacgagtgccagcgagggcgttggaccctgaagcagggtggattgttata
tcccacatcggttag
DBGET
integrated database retrieval system
