Cucurbita moschata (crookneck pumpkin): 111432606
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Entry
111432606 CDS
T05248
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111432606
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111432606
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
111432606
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
111432606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
VBS_C3G9
TPR_DNAAF5
Activator-TraM
Cnd1
Tudor_KDM3B
Motif
Other DBs
NCBI-GeneID:
111432606
NCBI-ProteinID:
XP_022925315
UniProt:
A0A6J1EHK9
LinkDB
All DBs
Position
Unknown
AA seq
1689 aa
AA seq
DB search
MAQKLQQQLKDVGSKLHTPPPTKDALIKLLKQAAGYLSELDQSPSASILESMQPFINAVI
KPELLQHQDRDVKLLVATCICEITRITAPEAPYSDDVLKDIFHLIVGTFSGLNDTNGPSF
GRRVVILETLAKYRSCVVMLDLDCDDLVNEMFSTFLAVAREDHPESVISSMQTIMVVLLE
ESEDIREELLFTLLSTLGRNKSNVSSAARKLAMNVIQNSAEKLEAAVKQFIVTSMSGENK
PPYNLIDYHEVIYDIYCCAPQILSGIAAYLIGELLTDQLDTRVKAVGLVGDLFSLPGSSI
SEVFQPVFSEFLKRLTDRVVEVRMSVLVHVKSCLLSNPLRDEASEIISALSDRLLDFDEN
VRKQVVSVICDVACLSLNAIPLDTIKLVAERLRDKSLLVKKYTMERLAEIYKVYSVKSSA
ESTNPDDFTWIPGRILRCFYDKDFRSEIIESILCGSLFPSEFPVKDRVKHLLRVFSTFDK
IELKALEKILEQKQRLQQEMQRYLSLRQMNQGGDVPETQKKILFSFRIMSRSFADSAKSE
ENFQILDQLKDANVWRILSNLIDPNTSFHQACNLRDELLKILGEKHRLYDFLNSLSLKCS
YLLFNKEHVKEILQEVEIQKSSGSMQDIKSSMTMLVILARFSPMLFSGSEEVLINFLKDD
NEIIKEGILHVLAKAGGTIREQLAVSSSSIDLILERLCLEGTRRQAKYAVHALAAITKDD
GLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRENEIEEFIKNQILKCDS
DVEDDAKTSWENRSEPCLLKIFAMKTLVKSYLPVKDAHLRLGINNLLEILGNMLAHGEIS
QDIKSSSVDKAHLRLAAAKAILRLSKQWDDKIPITTFHLTLKIPEITFPQAGKVFLSKVH
QYIKDRMLDAKYACAFLFNINGSNPSEFDEEKQNLADIIQMHHQAKARQLSMQSEANPMA
AYPEYIIPYLVHALAHHSCPDVDECKDVKAYELVYRRLHLILSLLVHKDEDVKLEANIAK
EKENISTIFSIFHCIKNSEDVVDAAKSKISYAICDLGLSIVKRLALKEDDLQDLTVPISL
PPILYKLKEKKGDDSVAGQTEGEAQTWLVEENVLAHFESLKLESNEISKEAAADEVQNKD
EKDGNDVPLGKMLKGIKSYGSREKKDKKDKKVKKKPIEKKNAENDVDILTMVREINFTTS
ELKPSNGHEDFLGKGMNVDSPAKSKKRKPSDATSAPIPKHKRSSSNQSRSRPKSTSKGRA
PGSGNTLLQGEVSPLESSEIDMGNNHDSDDDVSKEKEIGGSGESDLLVSCLKKPTGSSKT
KAKGSGTSHYDEENDLEDSSDLDVKHSSVLKKVDKNNTSNLKSKSSSGGAVKKRKRRSIA
GLAKCQFKYGENDIEDLSGCRIKVWWPMDKQFYKGTVKSYDPINRKHVILYDDGDVEVLK
LEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGWKSKDSGGSRSIKKPFKITKGKRTPKK
NLKHGQNGTSKSKISDSGVKKGSSDISNPGIFKSSNVYDEMDSGDSEGERAQTLAKEFTD
REDSDREIKSDSKGGEGDHHIAESDEEMPDVDDAEEKPDADELDEDPESLEKHADNARGG
KAHKEDREVNESSSRENIDDDNDSDSGKNQGTVVEQSSPGGEQKGEEDELSDDEPLSKWK
HRAGKRGLR
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaagcttcagcagcagctcaaggacgtgggatccaagctccacactcctcct
cccactaaagatgctctcattaagctcttgaagcaagctgcagggtacctttctgaattg
gatcaatcaccgtcagcttcaattttggagtcgatgcaaccttttatcaatgcagttatc
aagccggaattgcttcaacaccaagatagagatgtcaaacttctagttgctacatgtatt
tgtgaaataacacgaataacagcacctgaagctccatatagtgatgatgttttaaaggac
atctttcacctgatagtgggcacttttagtggattgaatgatactaatggcccttcattt
ggtaggagagttgtcattttggagacacttgctaaatataggtcgtgtgttgtaatgttg
gaccttgattgtgatgatctggtcaatgaaatgttcagcacgtttcttgccgttgccagg
gaggatcatcctgaaagtgttatctcatcgatgcaaactataatggttgttctcttagag
gaaagtgaggacatcagagaggagctcttatttactctattatcgactttaggtcgcaat
aaaagtaatgtttcttcggctgcaaggaagcttgctatgaatgtgatacagaattctgct
gaaaaacttgaagctgctgtaaaacagtttattgtaacttcaatgtcaggagaaaacaaa
ccaccatacaatctgattgattaccatgaagttatttatgacatatattgctgcgccccg
cagattctatctgggattgctgcatacctcattggagagttactgactgatcagctggat
actcgtgtaaaggccgttggattggttggagacctgttttctctacctggctcttctata
tctgaagtttttcagccggttttctcagagtttctaaaaagactgacagatagggttgtt
gaggttcgaatgtctgtcctggtgcatgtgaagagctgtctactatccaatcctcttaga
gatgaagcatctgaaatcatttctgccctttctgatcggctgttggacttcgatgaaaat
gtgcggaaacaagttgtttctgtgatttgtgatgtggcatgtctttccttgaatgcaatt
ccgcttgatactataaagctcgtagctgaacgccttcgagataaatctctacttgttaaa
aaatatacaatggagaggctagctgagatatacaaggtctattctgtgaaatcttctgct
gaatcaaccaatcccgacgatttcacgtggattcctgggaggattttgagatgcttttac
gacaaggatttcagatctgaaataattgaatctattctttgtgggtcacttttcccatct
gagtttccagtaaaggatagagttaaacatttgctccgagtcttctcaacgtttgacaaa
attgaactcaaggctctggagaagattctggagcaaaaacaaaggttgcagcaagagatg
cagaggtacctgtctcttaggcaaatgaaccagggtggtgatgttcctgagacccagaag
aaaatactgttcagctttcgcattatgtctcggtcatttgctgattctgcaaaatctgag
gaaaattttcagattcttgatcaattgaaagatgccaatgtctggaggattttgagcaat
cttattgatccaaacaccagcttccatcaagcttgcaacttgcgggatgagttgcttaaa
atactgggcgaaaaacaccgcttgtatgattttctgaactcattatctttgaagtgttcc
tatttactattcaacaaggaacatgtaaaagaaatccttcaggaagtggagattcaaaaa
tcttctggcagcatgcaggacattaaatcatctatgactatgttagtgattcttgcacgc
ttcagtcctatgttattcagtgggtctgaggaggtgctaatcaattttcttaaagatgac
aacgagataataaaagaaggaattctgcatgttttagcaaaagctggtggtacaatccgt
gaacaattggccgtctcatcaagctccatagaccttatattagagcggctgtgcttagaa
ggcactagaagacaggccaagtatgctgtacatgcgttggctgctataacaaaagacgac
gggctaaaatcactttctgttctgtacaagaggcttgtggatatgcttgaggagaagact
catttgcctgctgtacttcagtccctgggatgtatagctcagacagcaatgcctgttttc
gaaaccagagagaacgaaattgaagagtttattaaaaaccagattcttaaatgtgattct
gatgtggaagatgatgcaaaaacatcttgggagaacagaagtgagccgtgcttgttaaag
atattcgccatgaagacattggtcaagagctacttacctgttaaggatgctcacctccgt
cttggaatcaataatcttctagagatccttggtaacatgcttgcccatggagaaatatcc
caagatataaaatcaagttcagttgacaaagcccatttaagacttgcagctgcaaaggca
attcttcgactatcgaagcaatgggatgataagataccgattactacttttcacttaacc
ttaaaaataccagagatcacgtttcctcaagctgggaaagtattcttgagcaaagttcat
caatacatcaaggacagaatgttggatgcaaaatacgcatgtgcattcttatttaacata
aatggttccaatccatctgagttcgatgaggagaaacaaaatctggctgatattattcaa
atgcatcaccaagcgaaggcacgtcaactgtcaatgcaatccgaagccaatccaatggca
gcttatcccgaatacataataccatacttggttcatgcccttgctcatcattcgtgtcca
gatgttgatgaatgcaaggatgtcaaagcatatgaattagtatataggcgattgcacctg
attctttctctactagtgcataaagatgaagatgtcaagttagaggctaatatcgccaag
gagaaggaaaatatatctaccatattttccatctttcattgtattaaaaatagtgaagac
gtagttgatgcagcgaagtcgaagatttcatatgcaatttgtgatcttggattgtcaatt
gttaagagattggccctgaaagaggacgatttacaagacctgactgtaccaatttctctg
cctcccatattgtacaaattgaaggagaagaaaggagatgattctgtggctggtcaaact
gaaggtgaagcacaaacgtggttggttgaggaaaatgttttggctcactttgagtcactc
aagttagaatcaaatgagatttctaaagaagctgctgcagatgaggttcagaataaagat
gaaaaagatggaaatgatgtgcctctaggaaaaatgctgaaaggtataaagtcatacgga
tcaagggaaaaaaaagataaaaaggacaaaaaggtcaagaagaaaccgattgaaaagaaa
aatgctgaaaacgacgttgatatcttgacaatggtgagggaaataaattttactaccagc
gaacttaaaccgagcaacggtcatgaagattttcttggtaagggaatgaatgtggattca
cctgcaaagagcaaaaaaaggaaacctagtgatgcaacttctgctccaattcccaaacac
aagcggtcatcatctaatcaaagtcgttctagacccaaaagtacttcaaagggacgtgca
cctggttcaggaaataccttacttcaaggagaagtttctccactagagtcaagtgaaatc
gacatggggaataaccatgattcagatgatgatgtatccaaggagaaggagattggtgga
agtggcgagtcggatttattggtctcatgtttgaaaaagcctacaggttcttccaaaact
aaagctaaaggctcaggcacgagtcattatgatgaggaaaatgaccttgaagattcaagt
gaccttgatgttaagcattctagtgttctgaagaaggttgataagaacaacacgagtaac
ttgaaatccaaatcctcaagtggtggggctgtgaagaagaggaaacgaagaagtattgcc
ggattagcaaagtgtcagttcaagtatggtgaaaatgatattgaagacttaagtggatgc
agaattaaagtttggtggcccatggataaacaattctataaaggcacagtgaaatcttat
gatccaataaataggaaacacgtgatactatatgatgatggagatgttgaagttctcaaa
ctcgagaaggagcgatgggaggtcattgacagtgatcacaagacttcaaagaaactaaag
ctgtccaggagtcttccttccctcgaagttactcttggctggaagagtaaagattcaggt
ggttcacgttcaatcaagaaaccattcaaaataacaaaaggaaaaaggacaccaaagaaa
aatttaaagcatggtcaaaatggtacatcaaagtcgaaaatttcagattctggcgtgaaa
aaagggagttcagacatttcaaatcctggaattttcaaaagctctaatgtatatgacgaa
atggactcaggtgattctgaaggagagcgtgcacagactctcgccaaggagttcacggac
cgggaggactccgatagggaaatcaagtctgactcaaaaggaggtgaaggagatcatcat
attgcggaatctgatgaagagatgcctgatgttgatgatgcagaagagaagccggatgct
gatgaacttgatgaggatcctgagagtcttgagaaacatgctgacaatgcaagaggaggt
aaggctcataaagaagacagggaagtcaacgaatcaagttcaagagagaacattgatgac
gacaacgactccgattctggaaagaatcaagggactgtagtcgaacaaagtagtcctgga
ggggagcagaaaggcgaggaagacgaactttctgatgacgagcctctgagcaaatggaag
catcgagcaggaaaacgaggcttgagatga
DBGET
integrated database retrieval system
