Cucurbita moschata (crookneck pumpkin): 111433106
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Entry
111433106 CDS
T05248
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmos01009
]
111433106
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111433106
Protein phosphatases and associated proteins [BR:
cmos01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111433106
Membrane trafficking [BR:
cmos04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
111433106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
111433106
NCBI-ProteinID:
XP_022925811
UniProt:
A0A6J1ED73
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MESQPSQSGRSPTDYSSLISRETRLDRTISSPSAKSNTDASSQSLSSILNNPHAGKSDAS
WVGWWSSPSTVSPPEFMPLASTIASSEVTRLDFNSYTAVISDPFNRFEDIRNHSSKEDGG
LDSIGGQGEALVACLREVPALYFKEDFALEDGATFRAACPFLNVSQNFVLQEKLSHYLDV
VELHLVKEISLRSNSFFEAQGQLQDLNVKIVEGCSRIRQIKETIRLLDVDLVDSAREIQA
QNATRNNLLALQHKLKLILYVNQAISALKLLVASADCAGALDVTDDLLHLLEGDELAGLH
CFRHLRDHVAASIESITSILSAEFMRASIHDAGDVDIVIITETKARASNLMNGKDEQVKL
DEEETSNFCDHLLPIIIGLLRTAKLPSVLRLYRDAVTADMKTAFKNAVAELLPVLLLRPL
DSDFAPGERTVDADGGGASLASKLRGLSSEGFVQLLSAILKIVQVHLVRAAEVKKSIEWI
MCNLDGHYAADSVAAAIVIGAAASGTAQDSDNQGGLLLPHLPQQAAAKVTSSQGKENEAA
NPSNMSRNFRADVLRENTEAVFAACDAAHGRWAKLLGVRTLVHPKLRLQEFLSIYNITQD
FITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMTKIKAVLDQETWVEVDVPDEFQTV
AESICSQELLSEKVDHAQGNMDRSYSDVAANNGDSRIVGGESLNAQQNTEQIDSSDMSGG
NTAHVKPTPADTVEKSNADVTNTTTQVNNTNVKEHGKSSSQTLQYKGVGYHMVNCGLILL
KMLSEYIDMNDSLPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLAL
ASQVISFTFAIVPEIRRILFLKVPEARKTMLLSEIDRVALDFKVHRDEIHTKLVQIMRER
LSVHLRGLPQIVESWNRLENSDPQPSQFARSLTKEVGYLQRVLSRTLHEADVQAIFRQVV
KIFHLQISEAFSRLDISTPQSKDRLLRDVKHILGCIRSLPSDNSSKPDIPNWGQLDEFFD
QRFGSEAG
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccagccttcccaatcgggaaggtccccgactgactattccagcctcatcagt
agagaaacgagacttgatcgaactatttcctccccctccgctaaatccaacaccgatgcc
agcagccagagcttgtcttcaattctcaacaacccgcacgctggaaaatccgatgcgtcg
tgggttggctggtggtcatccccgtccaccgtgagcccacctgagttcatgcccctggct
tccaccatagcctcatccgaagttactcgattggattttaacagctacacggctgtgatc
tcggatccttttaatcgattcgaggatatacggaaccattccagcaaggaggacggtggc
ttggatagcattgggggccaaggcgaggcccttgtggcatgtctgagagaggttccagcg
ctttactttaaggaagatttcgcattggaggacggggcaacattccgtgcagcgtgcccc
ttcttgaatgtatcgcagaattttgtgctgcaagagaagctttcgcattatttagatgtg
gtggagttgcatttagtgaaggaaatttcactgcgttccaattctttcttcgaggctcag
gggcagctacaagacttaaatgtcaagatagtggaggggtgtagccggatacggcaaata
aaggagaccatacggctcttggatgttgatttagtggattctgccagggaaattcaggcg
cagaatgcgaccaggaacaatttgttggctcttcagcacaaattgaagcttattttatat
gttaatcaggccatttcagctcttaaattgctagtagcatcagcagattgtgctggagct
ttggatgtgactgatgatttactacatcttctggagggtgatgaacttgctggtctacat
tgctttcgtcacctacgtgatcatgtagcagcatcaattgaatccataaccagcattctt
tcagcagagtttatgcgcgcctcaattcatgatgctggagatgtagatatcgtaattata
actgaaacaaaagcaagggcttcaaatttgatgaatggaaaggatgaacaggtcaagttg
gacgaggaagaaacctccaacttttgcgatcatcttcttcctattatcattgggttgctt
aggaccgccaagcttccctctgtattgaggttatatcgtgatgcagttacagctgatatg
aaaactgcttttaagaatgcagtggcagaattacttcctgttcttctactcagacctcta
gactcggattttgcacctggagagagaacggtagatgcagatggtggaggtgcgtcgctt
gcaagcaagctgaggggcctctcatctgaaggctttgttcaacttttaagtgccattttg
aagattgtacaggtacatttggtgcgtgctgcagaagtgaaaaagtctattgaatggatt
atgtgcaaccttgatgggcattatgctgcagattcagttgctgctgcaattgttattggt
gctgcagcttctggtacagctcaagatagtgataatcaaggtggtttgcttcttccacat
ttacctcagcaagcagctgccaaggttacttcctcacagggaaaggaaaatgaagcagca
aatccttcaaatatgtctagaaatttcagagctgatgtactgcgagaaaatacggaagct
gtttttgcagcttgtgatgctgctcatggaagatgggctaaactccttggagttcgcact
cttgttcatccaaagttaagattgcaagagtttttaagcatatacaacattacacaagat
tttattactgccactgaaaagataggtggaaggttgggatatagcattcgtggaacttta
cagtcccaggccaaagcttttgttgattttcagcatgaatctcgtatgacaaaaataaaa
gcagtgcttgatcaggaaacatgggttgaagtggatgttcccgatgaatttcaaactgta
gctgaatcaatatgttctcaggagctgctttctgaaaaagttgatcatgctcagggtaat
atggatcgaagctacagtgatgtggctgcaaataatggcgattcacgcattgtaggtggt
gaatctctcaatgctcaacaaaacactgagcagattgattcaagtgacatgtctgggggg
aatactgcacatgtgaagcctactcctgcggatacagttgaaaagagtaatgctgatgtc
acaaatactacgacacaagttaacaacactaatgtgaaggaacatggaaaatcgagttct
cagactttgcaatacaaaggcgttggttatcatatggtaaactgtggtttgatcttgctc
aagatgttgtcggagtacattgacatgaacgattctcttccagcactatcttccgaagtt
gtacatcgtgttgtggaaattctcaagtttttcaatacaaggacgtgtcaacttgttctt
ggagctggggctatgcaggtgtctggtttgaagtctatcacatccaaacacttggccctg
gccagtcaagttatcagttttacctttgccattgttcctgaaattaggaggatccttttt
ctcaaggtacccgaggcacgaaagacaatgttactctcagagattgatcgagtggctcta
gatttcaaagttcaccgagatgaaattcatactaagctggtccagataatgagggaaagg
ttatcggtacatcttcgtggcctgcctcaaattgttgaaagttggaataggctcgagaat
tctgaccctcagcctagtcagtttgctcgatcacttaccaaggaagttgggtaccttcag
cgtgtcttatctcgaaccttacatgaggctgatgttcaggcaatatttaggcaagtggtg
aaaatcttccatttacaaatttctgaagcattttcacgattagacataagcaccccgcaa
tcaaaggataggctgcttcgtgatgttaagcacattcttggctgcataagatctttgcct
agtgacaactcgagtaaacctgacatcccaaactgggggcaacttgatgaattctttgat
caaagattcggatctgaagctggataa
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