Cucurbita moschata (crookneck pumpkin): 111433412
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Entry
111433412 CDS
T05248
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmos01001
]
111433412
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111433412
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111433412
Protein kinases [BR:
cmos01001
]
Serine/threonine kinases: Other
Other
111433412
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111433412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
LisH
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WD40
Beta-prop_EML
EIF3I
Motif
Other DBs
NCBI-GeneID:
111433412
NCBI-ProteinID:
XP_022926230
UniProt:
A0A6J1EKI8
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MEPPAMDEQSNEAQGHGEEPPVPSAPAVAEIQSQSQEERGEVHEEEEAKNEDDELIARAH
NLMEKITSSPDNPSPTVLHALASLLETQESRYIAENGNSSSNARVSHSIGRLGNVVREND
EFLELISSKFLSDTRYSTSIQAAATRLLLCCSLAWTYPHVFEDDVLENIKKWVMEEAGRI
STEDLNWKNELGGRDVSDSEMLRTYSTGLLAICLVGGSQLVEDVFTARLSAKLMRFLRVH
VLGDVSQKDGNHLIEAKNASGASGIKVRDENRVRVRQVLETSHLDDSRTAEERSVDDQGF
DRDRERGLSRLAPAEECWAGEEEPDGLATRSDVYEVDVEGKDRWHAVDFRDGRTKYGELD
DNVRDDSTRHKMSRSRSRGKGRMTEGALEIDHALTSPISGNRWRSSRERSSFKNLDVKKV
SDAGRTAGRINCDISSMERDDNDDCYQECRVGSKDISELVKKAVCAAEAEARAVGAPLEA
IKAAGDSAAEFVKSAAFEDFKTSNDEEAAFLAASRAATTVIDAANATEVSRSQSDSNVSS
ADPGTTGKEMNEQTEDFFIPDFDSLTQLRKKYCIQCLEILGEYVEVLGPVLREKGIDVCL
TLLQRSSKQSETLNAEMLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRVALTFFG
LSFCLFTIGSLQGIMERVCALPSDVVYQVVQLAIQLLECPQDQARKNAALFFAAAFVFRA
VLDAFDAQDGLQKLLELLNDAASVRSGVNSGALGPSGTGALRNDRSPTEVLTSSGKQIAY
HTCVALRQYFRAHLLLLVESIRPSKSSRSGARNASSVRAAYKPLDISNEAMDTVLLLLQK
DRKLGAAFVRTRWPAAEKFLNCNGHITMLELCQAPPVDRYLHDLLQYALGVLHIVTLVPN
CRKMIVNATLSNNRVGIAVILDAASIASNFVDPEIIQPALNVLINLVCPPPSISNKPPVV
ESRAVYMSGQGDQRERNGESSIVDRGNTSVTGQANNNNSQNQVATPTSRLVGDRRISLGA
GAGCAGLAAQLEQAYRQAREAVRANNGIKVLLHLLQPRIFLPPAALDCLRALACRVLLGL
ARDDTIAHILTKLQVGKKLSELIRDSGSQISGTEQGRWQAELSQVAIELISIVTNSGRAS
ALAASDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLSKAAYALLKEARLT
PLPLLAAPSSLASYQVSKLEAPSSQLQLPYGRVPCGFLTDKPKSAREEDTSLKGNINMSC
PRKKPLIFSTPFGTNSKCQPKSLESSSSAVRKLSSASKQSAVPLSSNETTLVIDTESQCK
TPIILPMKRRLSELKDTCTILSSKRLHSNEPGLYSPICPTSISSRKSSLTDFGFSTPKTT
NMRDQLGRPTPGGFWTDCLDDNQHSSSQVGLITPSSHPGNLNDPQPSNSERLTLDSLVVQ
YLKHQHRQCPTPITTLPPLSLLQPHVCPEPKRSLDAPWNVTSRLGSREFRSIYGGVHGNR
RDRQFVYSRFRPWRTCRDDASALLTCLSFLGDSRVAVGSHDGEVKIFDSNNNSILESCSS
HQSPLTIMESYISGETQFVLSSSSLDVRLWDASSISGGPMHSFEGCKAARFSNAGNVFAA
LASEPARREILLYDIQTCQLELKLSDTNVSSAGRGLAYSHVHFSPSDTMLLWNGVLWDRR
EPGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKLRLLRSVPSLDQTAITFNASGDV
IYAILRRNLEDVMSAVHTRRIKHPLFAAFRTIDAVNYSDIATIPLDRCVLDFTTEETDSF
VGLITMDDQDEMFSSARVYEIGRRRPTDDDSDPDDAESESEEDDDDDDDDDADDLDPILG
LDIDGDGVSDSDMSNEDDDDSVSDVDDEDDGDFVMDDIEFGGGPGMLEIMTEGDDEEDDS
QLLEYFSSGEDDDDDDDDFVSNGYGF
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaccggccatggacgagcaatcaaacgaggcgcaaggtcacggcgaagagcct
cctgttccatctgcgccggccgtggcggaaattcaatcacaatctcaagaagaacgaggg
gaggttcacgaagaagaggaggctaagaatgaagacgacgagttgattgccagggcacat
aatttgatggagaagatcacttcttcgcctgataaccccagccctactgttcttcatgcc
cttgcctcacttcttgagactcaagagtccagatacattgcagaaaatggtaattcgtct
agcaatgctcgcgtatctcatagtattggaaggctagggaatgtagtccgggagaacgat
gaatttcttgaattgatttcctcaaagtttctttcggacacaagatactcaacctccatt
caggctgctgctacaagacttcttttatgctgttcactggcttggacgtatcctcacgtt
tttgaggatgacgtcttggaaaacataaaaaaatgggtgatggaggaagccgggaggatt
tcgaccgaagatctaaactggaaaaatgaattaggaggaagggatgtgtcagattctgaa
atgttaaggacatattctactggactacttgctatatgcttggttggtgggagtcaatta
gtagaagatgttttcacggctagattatctgcaaaacttatgcgctttcttcgtgttcat
gttcttggagacgtgagtcaaaaagatggtaatcatttaatagaagccaaaaatgcgtct
ggagctagtggcatcaaagttagagatgaaaatagagtgagggtacgacaagttctagaa
acatctcatttagatgattcaagaacagccgaggaaagatctgtagatgatcaaggtttt
gatagggatcgtgagagaggcctaagtaggctggcaccagcagaagaatgttgggctggt
gaagaggaacctgatgggttggctacaaggtctgatgtctatgaggttgatgtagaaggc
aaagacagatggcatgctgtagattttcgggatgggaggacaaaatatggtgagcttgat
gacaatgttagagatgactctacaagacacaaaatgagccgtagcagatctagagggaaa
ggaagaatgactgaaggtgctcttgagattgatcatgcactcacttcaccaatatctggt
aatagatggcgaagttctagagaaaggagttcgtttaaaaatctggatgttaaaaaagta
tctgatgctggtaggaccgctggcaggatcaattgtgatatttcttctatggaaagagat
gataatgatgattgctaccaagaatgcagagttggatcgaaagatatttctgagcttgta
aagaaagctgtttgtgctgcagaagctgaagcaagagcagtcggtgcaccattagaagcc
ataaaagcagcaggtgattctgctgctgagtttgttaagagtgcagcttttgaggacttt
aaaacttcgaatgatgaagaagctgcatttttagctgcttctagagctgcaactactgtg
attgatgctgcaaatgctactgaggtttccaggagccagagcgattcaaatgttagttca
gcagatccaggtaccacagggaaggaaatgaatgagcaaactgaagattttttcatccct
gattttgactccctcacacaactgagaaagaaatattgtattcaatgcctcgagattctt
ggggagtatgttgaagtacttgggcctgttttgcgtgaaaagggcatagatgtatgtctt
acactactgcaaaggagttccaagcaaagtgaaacattgaatgctgaaatgctcttgccc
gatgtgatgaaattaatctgtgctttggctgctcatcgtaagtttgcagcactttttgtt
gaccgaggtggcatgcagaaactccttgcagttcccagagttgctctaacattttttggg
ctctctttttgcttgttcacaattggttccctccagggaataatggaacgagtctgtgcc
cttccttctgacgttgtctatcaggtggttcaattagccatccagcttcttgagtgccca
caagatcaggccaggaaaaatgcagccttattttttgctgctgcttttgtgttcagagct
gttcttgatgctttcgacgctcaagatggcctacagaaattactggagctgttgaatgat
gctgcgtctgtgaggtctggagtgaactctggggctttaggcccatctggtacaggagct
ttgcgaaatgatcgatcaccaactgaagtacttacatcatctggaaagcaaatagcttat
catacatgtgtggcgttacgtcagtatttcagagctcatcttcttttgcttgtggaatct
attcgtcctagtaaaagtagtcgaagtggtgctcgaaatgcttcaagtgtgagggcagcg
tacaaaccacttgatattagtaatgaggctatggatactgtacttctccttttacagaag
gaccggaagcttggtgctgcatttgtaagaactcgttggcctgctgctgaaaagttctta
aactgtaatgggcatataaccatgttggagttgtgccaggcccctcctgttgatcgttac
ttgcatgatttacttcaatatgcattgggagttcttcatattgtaacgttagtgcccaac
tgccgcaaaatgattgtgaatgccacattaagcaataatcgtgttggtatagctgtcatt
ttggatgcagcaagtattgctagcaattttgttgacccagagatcattcagccggctttg
aatgtgttgatcaatcttgtttgtcccccaccatcaatcagcaataaaccacccgttgtg
gagagtagagctgtttacatgtctggtcagggagatcagagagagcgcaatggggagtct
agcattgtagatcgaggcaatacttcagtcactgggcaggctaataacaataattctcaa
aatcaagttgcaacaccaacatcaaggttggttggggatcgtcgaatatctttaggtgca
ggagcaggctgcgccggtcttgctgcacaattggaacaagcatatcgtcaagctagggaa
gcagtccgtgctaacaatggtattaaggttcttttgcatcttcttcagccaaggatcttt
cttcctcctgctgctctcgattgtctacgagctcttgcatgtcgggtcttgcttggttta
gccagagatgatacaatagcacacatattgacaaaacttcaggtggggaaaaaattatca
gaactaattcgagattcaggtagccagatatcaggaactgagcaaggtaggtggcaagcg
gagctttcccaggtcgctattgagcttatttcaatagtgacaaattctgggcgggcgagt
gctttggcagctagtgatgctgctaccccaactctgagacggatagaaagagcagccata
gctgctgctacacctataacttaccattccagggaacttcttcttttaattcacgagcat
cttcaggcatctggattaagcaaagctgcctatgcattgctgaaagaagccaggttgact
cctttgcctcttttagcagctccatcatctcttgcatcataccaagtttccaagctggag
gcaccctcatcccagctgcaattgccttatggtcgagtcccatgtggatttctgactgat
aaaccgaagtctgcacgagaagaagatacaagtttgaaaggcaatattaatatgtcttgt
ccaaggaaaaagccgttgatcttctcaactccttttggtacaaattcgaagtgtcagcct
aaatccctggaatcttcttcctcagcagttagaaaattgtctagtgcttcaaaacaatct
gctgtgcctctatcttcaaatgaaacaacccttgtcattgatacggagtctcaatgtaaa
acacccattatcttgcccatgaagcggaggttgtccgagttgaaggatacttgcaccata
ttgtcctcaaagcgacttcactctaatgagccaggactttattctcctatttgtcctact
tccatttcctctcgcaaaagtagtttaacagatttcggcttttctaccccaaaaactaca
aacatgagagatcagcttgggcgaccaactcctgggggtttttggaccgattgtttggat
gacaaccaacacagtagttcccaagttggtttgattacaccatcgtcgcatcctgggaat
ctaaatgaccctcaacccagcaatagtgagagactaactctagactcccttgttgttcag
tatctaaaacaccagcaccgccaatgtccaacgccgataactacacttcctccattgtct
cttttgcagcctcatgtttgccctgaaccaaaacgaagccttgatgccccatggaatgta
acatctcgtcttggttcacgtgaatttagaagtatatatggtggagttcatggcaatcgg
agggaccgtcagtttgtctacagcaggtttaggccttggcgaacttgtcgggatgatgct
agtgctcttttgacctgtctttctttcctaggagactcaagagttgccgtgggcagccac
gatggggaagtcaagatcttcgattccaacaacaatagcatattagagagttgctccagc
catcagtctcctttaactataatggagtcatatatttctggcgagacccagtttgtgctt
tcatctagctctttagacgtaaggttatgggatgcatcctccatttctggtgggcccatg
cattcattcgaaggatgcaaggctgccaggtttagcaacgctgggaacgtttttgcagca
ttggcatctgagcctgctcgacgggaaatactcttgtatgatattcagacctgccaacta
gaactgaaactatctgataccaatgtcagttctgcaggtcgagggcttgcttattctcat
gtacacttcagcccttcggatacaatgttgctctggaatggggtcttatgggatcgacgg
gaaccaggacctgtccatcgctttgatcagttcactgattatggtggtggtggttttcat
ccagctgggaatgaggtaattattaattccgaggtttgggatctacgaaagcttaggctt
ctccgcagtgtaccttccctcgaccaaacagcgataacattcaacgcgagtggtgatgta
atttatgcaatcttgaggagaaatcttgaagatgtaatgtcagctgttcatactcgtcgc
atcaaacatccgcttttcgctgcatttcggaccattgatgcagtgaactattcagatatt
gcgactatcccacttgatcgatgtgtccttgacttcacaacagaggaaactgattctttt
gttggtttgatcacaatggatgatcaagatgagatgttttcttctgcacgagtctatgaa
attggtcgtcgaaggcccactgatgatgattctgaccccgacgatgctgaaagtgagagt
gaggaagacgatgacgatgacgatgacgatgacgcggatgatttggatccaattttgggt
cttgatattgatggggatggtgtgagtgattctgatatgagtaatgaggacgatgacgac
agtgtgagcgatgttgatgacgaggatgatggagattttgtgatggatgatattgagttt
ggtgggggtcctggaatgttggagataatgacagaaggtgacgatgaagaagatgatagt
caacttctggaatattttagcagtggggaagatgatgatgacgacgatgatgattttgtc
agtaacggatatgggttttaa
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integrated database retrieval system
