Cucurbita moschata (crookneck pumpkin): 111433536
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Entry
111433536 CDS
T05248
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111433536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111433536
04121 Ubiquitin system [BR:
cmos04121
]
111433536
03036 Chromosome and associated proteins [BR:
cmos03036
]
111433536
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111433536
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111433536
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111433536
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111433536
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111433536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-C3HC4_2
BRCT_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4_3
zf-RING_6
zf-C3HC4_4
zf-RING_5
zf-RING_10
RTT107_BRCT_5
zf-rbx1
PHD_NSD
DUF3638
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
111433536
NCBI-ProteinID:
XP_022926367
UniProt:
A0A6J1EEB5
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MGDFSHLEKMGRELKCPICLSLLNSAASLGCNHVFCYVCIEKSMKSASNCPVCKVPFRRR
EVRPAPHMDNLVNIYKSMEAASGMNIFISQNLSSAKLSDGENQVEGDGKGSKRHNAETSE
FIAYEQRTLEKEPQRTRKSKRKNSACSPVKPSFPRKKRVQVPQCPLSETPTRSAKLVHSF
NKENEEPRKSAVASENKGQPVLSPFFWLRERDEDEKSNQQSDMDQPTDSMTMNVLSFSDV
KDSLDESPSKPSMEEVCDKPSYDLDLFDSEMFEWTQRACSPELCLSPFKLQVEDIARTEI
ALLAAAPNEEPRVQNLNGRSNHSGGIPDELVVADVSLLEDNSTKDHTGSAKLSKRGRKRK
ETALRKCAKRLGESAIDNYSHSGMETECLLQKQEHHVSNSSDNLKNVTKRSKRKMHRGID
ANKMTLENVPDDPINLATPNENFGTETSGFPEVEKVSQFPEKSHKNGRACKKTHFGRDAK
QATPENAIADPVSLGAPDDEHENFGTELLALPEVEKVCQLPENSRMKGRGRKKAHFGNDA
NMTILEDVPAHPIGLGTPNDGSRNFGTELSAFQEIEKVSQFPEKNNKNGEAGKDQRLVQY
RRKSKKQKLYSGDDKLREKQSFNQNQQDGCAIPDLTTTPGIATSTDKKREHEKQDKSSSA
CITTSEYDNVTQEKPVAQENRIELSEIFPCCTDTKILDPMAKKVGSGKHERLDNEFHCAF
CLSSEESEASGRMVHYFNGKPIATDDVKNSKVVHAHWNCVEWAPNVYFDGDTAINLEAEL
SRSRRIKCGFCGNKGAALGCYEKCCRKSFHVPCAKLMPQCQWDTENFVMLCPLHPDSKLP
SQYLGHQERKRSCAPKRQSNTKCIAVAREISNSRGFTFRESSKKLVLCCSALTTAEREAV
TEFQRLSGVPVLQKWDDSVTHIIASTDENEACKRTFKILMGILKGKWVLSLKWIRACIQA
MEQIEEERFEITLDVQGIRDGPQLGRLRVLNNQAKLFSGFKFFFTADFLPSYKGYLQQLV
TAAGGTILLRKPVSSNQNTPCSSPNCQVFIIYSLEIPDQCDPGERSKILNYRRSDAESLA
KSAAAKVATNLWLLNSIAGSKLSSRLVE
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttcagtcacctggagaagatgggaagagagctcaaatgcccaatttgtttg
agccttttaaactctgccgcttcactgggatgcaaccacgtattctgctatgtatgtata
gagaagtcaatgaaatcggcttcaaactgcccagtttgtaaggtgccttttcggcgtaga
gaagttcgtcctgctccacacatggataatttggtgaacatttacaaaagcatggaagct
gcttcgggaatgaatatatttatttctcagaatttgtcttctgctaagttatctgatgga
gagaatcaagtggaaggtgatggcaaaggttcaaaacggcataatgcagaaaccagcgag
ttcatagcttatgaacaaagaactttggaaaaagagccacaaaggacacgaaaatccaag
cggaagaattctgcttgttcccctgtgaaaccttcatttccaagaaagaaaagggttcag
gtgccgcagtgtcccctttcagaaacacctacccgatctgcaaagttagtacatagtttt
aacaaggagaatgaagaaccgagaaaaagtgcagttgcttcggagaataaaggtcagcca
gtgctttcgccttttttttggttgagagaaagagatgaagatgaaaagtcaaatcagcag
tctgatatggatcagcctacggactcaatgacaatgaacgttctttccttcagtgatgtt
aaggattcactggatgaaagcccttcaaagccttcaatggaggaagtgtgcgacaagcca
tcctacgacttggatctttttgatagtgaaatgtttgaatggactcaaagagcatgttcc
cccgaactttgtttaagtccctttaaactgcaggttgaagatattgccagaactgaaata
gcattattagcagcagcacctaatgaagaacctagggttcaaaatctaaatggaaggtct
aatcacagtggtggtataccggacgagttggtggtagctgatgtgtcccttctagaagac
aacagtacgaaggatcatactggaagtgctaaactcagcaaaagaggtagaaagagaaag
gaaactgcactgaggaaatgtgctaaaagattgggagaatcagccattgacaattattcc
cattcaggtatggaaaccgaatgcttgcttcaaaagcaggaacaccatgttagtaacagc
tctgataatctgaaaaatgttaccaaaaggagcaagaggaaaatgcaccgtggtattgat
gcaaataagatgactcttgaaaatgttcctgacgatccaattaatttagccactccaaat
gagaattttggaaccgagacatcaggcttcccagaagtggaaaaggttagtcaattcccg
gaaaagagtcacaagaacggcagagcctgcaagaaaacgcacttcggtagggatgccaaa
caggcgactccagagaatgctattgccgatccagtcagtttaggagctccagatgatgaa
cacgagaattttggaaccgagctgttagctttaccagaggtcgaaaaggtttgtcaatta
cctgaaaatagtcgcatgaaaggcagaggcaggaagaaagcacactttggtaacgatgca
aatatgacgattcttgaagacgttcctgcacatcccattggtttaggaactccaaacgat
ggttctcggaattttggaactgagctatcagcttttcaagaaatcgaaaaggttagtcaa
ttcccagaaaaaaataacaagaatggtgaagccggcaaagaccagagattggtccaatac
cgcaggaagtctaagaaacaaaagttatattcaggggacgacaaactgcgagagaaacaa
tctttcaatcagaatcaacaagatggttgcgccattcctgatttgaccaccacacccgga
attgctacatctactgataaaaaaagggaacatgagaaacaagataaaagttcctctgct
tgcataacaactagtgagtatgataacgtcactcaagaaaagcctgttgctcaggaaaat
cgaattgagctctctgaaatttttccatgctgtaccgacacaaaaatcctggatcctatg
gccaaaaaagttggttcaggaaaacatgaaagattggataatgaatttcattgtgctttc
tgtctctcatcagaagagtcagaggcttctggaagaatggtccactacttcaatggaaag
ccgattgcaacagatgacgtaaaaaactctaaggtcgtacatgcacactggaattgtgtt
gaatgggcgcccaatgtttactttgatggtgacacagcgattaaccttgaagctgaactc
agtagaagtcgaagaattaaatgtggtttctgcggaaacaagggtgctgctcttgggtgt
tatgagaagtgttgtcgtaagagctttcacgttccttgtgcaaaattgatgccacaatgt
caatgggatactgaaaattttgtgatgttatgcccacttcatccggattctaaactgcca
agccaatatttgggacatcaagaacggaaaagaagttgcgctcctaagcgacaatcgaac
actaaatgtatagcagttgcgcgtgagatcagcaatagtagagggtttacatttcgtgaa
tcatctaagaaattggttctgtgctgttcagctctcaccacagcagagagggaagctgtt
actgaatttcagagattatctggagttccagtgttacaaaaatgggatgatagcgttaca
catattattgcatcaacagatgaaaatgaagcatgtaaaagaaccttcaaaattttgatg
ggcattttgaagggaaaatgggtactgagtctgaaatggattagggcttgtatacaagcc
atggagcaaatagaggaagaacgctttgagataactctagatgtgcagggaatcagagat
ggccctcaacttggaagattgagagtcctgaacaatcaagcaaaacttttttctgggttc
aagttcttctttacagcggatttcttaccttcatacaaaggatatctccaacaacttgtt
actgcagctggaggaactattctgcttagaaaaccagtttcaagcaatcaaaacacccct
tgttcttcacctaattgccaagttttcatcatttacagtcttgagattcctgatcaatgc
gatccaggtgaaaggagtaagattctcaattacagacgttccgatgccgagtcgcttgct
aagtcggctgcagccaaagttgcaaccaatctatggcttttgaactcgattgcaggcagt
aaattgagcagtcgtcttgtggagtaa
DBGET
integrated database retrieval system
