Cucurbita moschata (crookneck pumpkin): 111434183
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Entry
111434183 CDS
T05248
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111434183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111434183
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111434183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
CNH
Vps39_1
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
111434183
NCBI-ProteinID:
XP_022927318
UniProt:
A0A6J1EKN6
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MAKPERAVLEPLGEEFDISTHFRTSIRSLAVSPLSDSQTLIFAGTKSGALILFSATPESS
SFTALGSETTGLDAAPRVVSSSEGFSLVRSVAVSVSSIVYLNVLRGIDKVLVLCSDGFLY
IVDSLLLVPVKRLTGLKGVSLITKRIRSSESECSSLYGRADSNSGLGSPRQRLLQSLGSG
IRTNGLKIKESEWPQEESNCVFAALVGKRLILFEVVLGRRTGRNERGVNDANESLLILKE
LQCTEGVSTMVWLNDSIIVGTASGYYLVSCVTGANSLIFKLPELSSPPCLKLLQKEWKVL
LLMDRVGITVNAYGQPVGGSLVFHDLPNSVAEISSYVVVASSGQLKLYHRNTGSCIQTIT
FNGNGIEPCIVADEEDGSGDVIAVAVTNKVMCYKKVPCDEQIKDLLRRKNFKEAISLAED
LECAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVMKDPNRWSL
LIPRNRYWAMHPPPSPFEDVIDDGLLAIQRATFLKKVGVETAVNEDFLLNPPSRSDLLES
AVKHIVRYFEASRQKELTSAVREGVDTLLMCLYRTLNSIDKMEELASSANSCVVEELESL
LEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGTLDNNVVDISGKE
TAAAEASKILEESSDQALVLQHLGWIADINQHFATQILTSEKRSSQLSPDDIIRAIDPKK
VEILQRYIQWLIEEKESCDPHFHSLYALSLAKSAVEVESTQNLDSSSDTKISDQRINSMF
EQPIRERLQIFLQSSDLYDPEEVLDLIEGSELWLEKAILYRKLGQEALVLRILALKLEDS
EAAEQYCAEIGRSDAYMQLLDMYLDPQNGKEPMFKAAVRLLHNHGEFLDPLRVLETLSPD
MPLQIASETILKVLRARVHHHRQGQILHSTSRALDLEARLARLEERSRHVQINDESLCDS
CHARLGTKLFAMYPDDTIVCYKCYRRQGESTSVTGRNFKQDILIKPGWLVMD
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccgaaagggctgttcttgaaccactcggtgaggagttcgatatatccact
cattttcgtacttcaattagatctctcgccgtctcccctctctctgattcccagacccta
attttcgccggaactaaatctggggcacttattttattctctgcaactccggaatcttca
agttttaccgcacttggttcggaaacaaccggcttggatgctgctcccagagttgtctct
tcatcggaggggttttcacttgttaggagtgttgcggttagcgtttcctcaattgtgtat
ttgaatgttcttcgtggaattgataaggttttagtactttgttccgatgggtttctgtat
attgttgattcacttcttttagtgccagtaaagaggttgaccggtttgaaaggggtttct
ttgattacgaaacgaattaggagtagtgagtctgagtgttctagcttgtatgggagggcg
gatagtaattctggattagggagcccacgtcaaaggcttttgcagagtctgggaagtgga
atacgaacaaatggcttgaaaatcaaggagtcagaatggccgcaggaagaaagtaattgc
gtttttgcagctctagttggtaaaaggttgattttatttgaagttgttttaggtcgtcga
actggtagaaacgagcgaggtgttaatgatgccaatgagtctcttctaattttgaaagag
ttacagtgtactgaaggagtttcaacaatggtgtggctcaatgattcaataatcgttgga
acggctagtggctattatctcgtttcatgtgttacaggagcgaatagtttaatattcaaa
ttaccagagttatcgagtcctccatgccttaaattgttgcagaaagagtggaaagtgcta
ctattgatggatagagtaggcatcactgttaatgcgtacggtcaacccgtcggtgggagt
ctcgtgtttcatgatcttccaaattctgttgctgagatatcttcgtatgtggttgttgca
agtagtgggcagctgaagttgtatcataggaatactggtagttgtattcaaactattact
tttaatggaaacggaattgagccttgcattgttgcagacgaggaagatggcagtggtgat
gttattgccgttgctgtgactaacaaggttatgtgctataaaaaagtgccttgtgatgaa
caaattaaagatttgctgagaaggaagaattttaaggaagcaatctctttggctgaggac
ctagagtgtgcaggtgaaatgtccaaggatatgctatactttgttcatgctcaaattgga
tttctcttgctttttgacttgcaatttgaggaagctgtaaatcactttttgcaatctgag
acaatgcagccttctgaaatatttccatttgtgatgaaggacccaaatcgttggtccctg
ctgattcccagaaatcggtattgggcaatgcatcctcccccttctccttttgaagatgtt
atagacgatggcttgcttgccatccaaagagccacatttcttaaaaaagtaggagtagaa
actgctgtaaatgaggattttctcttgaatccaccaagtaggtcagatttgttggagtca
gccgtaaaacatattgtcaggtacttcgaggcatcccgccaaaaagaattaacatcagcc
gttagagagggagttgacactctattaatgtgcctatatagaactttaaattctattgat
aagatggaagaactggcatcttcggcaaacagttgcgttgtggaggagttggaatcttta
ttagaggactctggacatttgcgtacacttgctttcctttatgcaagtaaagggatgagc
tcaaaggctcttgctatttggcgtatcttgggaagaaattatccatctcgccttttgaag
gactcctctatggatgaaggtactctggataacaatgttgtagatatatctggtaaggaa
acggctgctgcagaggcatcaaagattctcgaggagtcgtctgatcaagcattggttctt
cagcaccttggatggattgcagacatcaaccagcattttgctactcagattttgacatca
gaaaaaagatcatctcaattgtcaccagatgacataataagggctattgatcccaagaag
gtagaaattcttcaaaggtatattcagtggttgatcgaagagaaagagtcttgtgatcct
cacttccactcactatatgctctctcattagccaaatcagcagttgaagtcgaaagtact
caaaaccttgattcatcatcagacacaaaaatttctgatcagagaattaactcaatgttt
gaacagccaatccgagaaaggttacagatctttttacagtcttcagatttgtatgatcca
gaagaggttctagacttgattgaaggatcagaattatggttggaaaaggctattctatac
cggaaactagggcaagaggcgttggtcctccggattctagccttgaaacttgaagacagt
gaagctgctgagcagtactgtgctgaaattggcagatcagatgcctacatgcagttactg
gatatgtatttggatcctcaaaatggtaaggagcctatgtttaaagctgctgttcgcctt
ctccacaaccatggagaatttttggatcctttgcgagtcttagagactttatcgccagat
atgccgcttcaaattgcttcagaaacaatattaaaagtgttgagagctcgagttcatcac
caccgtcaaggacagattttacatagtacttcccgtgctctagaccttgaggcgaggttg
gccagattggaggaaagatcaaggcatgttcagatcaatgatgagagcctctgtgattct
tgtcatgcacgccttggaactaaattgttcgcaatgtaccccgatgacacaattgtctgt
tacaagtgctaccgtcgacagggcgagtcgacatcggtgactggccgcaacttcaaacaa
gatatcctgatcaaacctggctggctagtaatggattag
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