Cucurbita moschata (crookneck pumpkin): 111434205
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Entry
111434205 CDS
T05248
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111434205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111434205
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111434205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111434205
NCBI-ProteinID:
XP_022927353
UniProt:
A0A6J1EKS0
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MNASCFIESMFSVAFLGLIGFVLVLLKAKGVGMDPGKLFIGGISWDTDEDRLREYFQSFG
EVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVLEKHVIDGRTVEAKKAVPRDDQNVLS
RNNTGILGSPGPTRTKKIFVGGLASTVTESDFKTYFDQFGTITDVVVMYDHNTQRPRGFG
FITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRSQLGAYPYGFGRVGSYLN
GYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGLNVG
SNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGNGGNGSILSSSVQNLWGNVGNSVGTNSSH
LRTFPGSGGVHTGTNSLNGIGGLWGASASLVHGEHSGSPFNAVNLDFASGDGSLTSGTTV
GYARSVGTNVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGN
AASDVISRNNGGYTVGYGVSNRQSNRGIAA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttcctgtttcatcgaatccatgttttctgtagcttttttaggattgatcggt
tttgtgcttgttcttctcaaggcgaagggagtgggcatggatcctggcaagcttttcatt
ggtgggatttcgtgggacacggatgaagatcgtcttcgagagtattttcagagctttggg
gaagtggtggaggtgatgatcatgagggatcggaccactggccgtgctcgtggctttggt
ttcgttgtctttgctgaccctgttgttgcagcaagagttgtattggaaaagcatgtgatt
gatggaagaactgttgaagcaaagaaggctgttcctcgagacgatcaaaacgttttgagc
aggaacaataccggtatcctcgggtcaccaggtcctactcgcacgaaaaagatattcgta
ggaggtttggcatcaactgttacggagagtgacttcaaaacgtattttgatcagtttgga
acaatcacagacgtcgtggtgatgtacgatcataatactcagagaccgagaggtttcgga
tttatcacttacgagtcggaggaatcggtggagaaagttttatacaaaacttttcatgaa
ctcaatggtaaaatggttgaggttaagagggctgttccaaaggaatcatcaccagtgcca
aaccgaagtcaattaggtgcatacccttatggttttggtagagttggtagctatttaaat
ggctataatcaaggatataacccgacctcggttggggcatatggattgagatctgatgat
aggtttagtcctgttacagttggtcggggtggactttctccgatcagtcctggttatgga
atcgggctaaatctcgatacagggttgaacccgaactatgggacaggtctcaatgttggc
tctaaccttagctatggacgagtaatgagcccctcgtatggtggaaatttgaataggtat
ggtagcccgaaccccatggtgtatggtggtggcaatggaggtaatggttcgattttaagc
tcgtcggttcagaatctgtggggaaacgtcgggaactctgttggtacaaactcgtcacac
ttgaggacttttcctggctctggtggtgtgcatacaggaactaattcgttgaacggtatc
ggagggctttggggtgcttctgcaagcctagttcatggggaacattctggttctccattc
aatgctgttaatctcgactttgcgagcggcgatggcagcttaacgtcgggaacgactgta
ggttatgctagaagcgttggaactaatgtttcctcagcatctttgtactctgcaccaaat
atatatgatgaggttcatgggaacaatgatgaaggaaactcattttatgggcattccagt
tggcagttgttaccgaccgaactcgaggattcttcgtcggttggtttcgggcttgggaat
gcagcttcggatgttattagtagaaacaatggtggttatactgtcggatatggtgtttct
aatagacaatctaatagaggaattgctgcttag
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